RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 SLF2Q8IX21 1173 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 DNAJC25Q9H1X3 360 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 CBX8Q9HC52 389 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 A0A087WWV3 80 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 CERS3Q8IU89 383 aa22.67■■□□□ 1.22
CHRNA4-209ENST00000627000 PPP6R2O75170 966 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 TSPY3P0CV98 308 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 TSPY8P0CW00 308 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 PLCG2P16885 1265 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 RASA1P20936 1047 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 EN1Q05925 392 aaPredicted RBP22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 ZNF444Q8N0Y2 327 aaPredicted RBP22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 KAT14Q9H8E8 782 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 PFKFB1P16118 471 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 CMA1P23946 247 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 DGKHQ86XP1 1220 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 CLIC6Q96NY7 704 aa22.66■■□□□ 1.22
CHRNA4-209ENST00000627000 SHC4Q6S5L8 630 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 PIBF1Q8WXW3 757 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 PHF20Q9BVI0 1012 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 FOCADQ5VW36 1801 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 ADAMTSL1Q8N6G6 1762 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 FAM205CA6NFA0 338 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 CDK8P49336 464 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 PNMA1Q8ND90 353 aa22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
CHRNA4-209ENST00000627000 SNED1Q8TER0 1413 aa22.64■■□□□ 1.22
CHRNA4-209ENST00000627000 SLX4Q8IY92 1834 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 VEGFAP15692 232 aaPredicted RBP22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 SLC15A2Q16348 729 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 HS1BP3Q53T59 392 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 C16orf86Q6ZW13 317 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 ANKS1AQ92625 1134 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 SDF4Q9BRK5 362 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 KCNQ5Q9NR82 932 aa22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 TTF2Q9UNY4 1162 aaKnown RBP22.64■■□□□ 1.21
CHRNA4-209ENST00000627000 ZNF202O95125 648 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 CHRNA5P30532 468 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 EARS2Q5JPH6 523 aaKnown RBP22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 ZSCAN30Q86W11 494 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 CABP5Q9NP86 173 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 PCDHB6Q9Y5E3 794 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 XBP1P17861 261 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 ATP2B1P20020 1258 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 SCNN1DP51172 638 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 C11orf57Q6ZUT1 292 aaPredicted RBP22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 STAG2Q8N3U4 1231 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 CAMKK2Q96RR4 588 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 DBNDD1Q9H9R9 158 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 TCP11L1Q9NUJ3 509 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
CHRNA4-209ENST00000627000 G3V3G9 751 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 ZNF165P49910 485 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 PICALMQ13492 652 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 RILPL1Q5EBL4 403 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 DCAF8Q5TAQ9 597 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 MTMR7Q9Y216 660 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 H0YIN7 160 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 EYA3Q99504 573 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 STX8Q9UNK0 236 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 SUGT1Q9Y2Z0 365 aa22.62■■□□□ 1.21
CHRNA4-209ENST00000627000 KRT2P35908 639 aa22.61■■□□□ 1.21
CHRNA4-209ENST00000627000 NT5C2P49902 561 aa22.61■■□□□ 1.21
CHRNA4-209ENST00000627000 NPY5RQ15761 445 aa22.61■■□□□ 1.21
CHRNA4-209ENST00000627000 TMEM47Q9BQJ4 181 aa22.61■■□□□ 1.21
CHRNA4-209ENST00000627000 HPSEQ9Y251 543 aa22.61■■□□□ 1.21
CHRNA4-209ENST00000627000 KIF5BP33176 963 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 CLCN1P35523 988 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 GRIN1Q05586 938 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 NOM1Q5C9Z4 860 aaKnown RBP22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 DDX4Q9NQI0 724 aaKnown RBP22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 CCDC39Q9UFE4 941 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 CUTAO60888 179 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 PTMAP06454 111 aaKnown RBP22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 SCG2P13521 617 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 STX1AQ16623 288 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 RESP18Q5W5W9 173 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 STYK1Q6J9G0 422 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 RASGRP2Q7LDG7 609 aa22.6■■□□□ 1.21
CHRNA4-209ENST00000627000 GRM4Q14833 912 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 SPECC1Q5M775 1068 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 ZNF287Q9HBT7 754 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 MAD2L2Q9UI95 211 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 ADAMTS3O15072 1205 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 SYKP43405 635 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 SLC35G1Q2M3R5 365 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 CCDC178Q5BJE1 867 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 KRI1Q8N9T8 703 aaKnown RBP22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 STK32BQ9NY57 414 aa22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 NOL7Q9UMY1 257 aaKnown RBP22.59■■□□□ 1.21
CHRNA4-209ENST00000627000 PFKFB3Q16875 520 aaPredicted RBP22.58■■□□□ 1.21
CHRNA4-209ENST00000627000 NEDD1Q8NHV4 660 aa22.58■■□□□ 1.21
CHRNA4-209ENST00000627000 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms