RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 TRIOBPQ9H2D6 2365 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 MYH7P12883 1935 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 HMMRO75330 724 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 ERVK-24P63145 666 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 SEPT2Q15019 361 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 USP17L2Q6R6M4 530 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 HAUS7Q99871 368 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.225e-40■■□□□ 11.6
SOX2-OT-241ENST00000626948 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
SOX2-OT-241ENST00000626948 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 FARP2O94887 1054 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 HMGCRP04035 888 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 VCAM1P19320 739 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 CYP2B6P20813 491 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 CCL14Q16627 93 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 MORN1Q5T089 497 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
SOX2-OT-241ENST00000626948 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.21
SOX2-OT-241ENST00000626948 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
SOX2-OT-241ENST00000626948 GPR142Q7Z601 462 aa16.39■□□□□ 0.21
SOX2-OT-241ENST00000626948 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-241ENST00000626948 BTBD7Q9P203 1132 aa16.39■□□□□ 0.21
SOX2-OT-241ENST00000626948 MBD4O95243 580 aa16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 DPF3Q92784 378 aa16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 PUS7LQ9H0K6 701 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
SOX2-OT-241ENST00000626948 MYH8P13535 1937 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 TFRCP02786 760 aaKnown RBP16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 FEZ1Q99689 392 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
SOX2-OT-241ENST00000626948 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 AKR1B1P15121 316 aa16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 CACNB2Q08289 660 aaPredicted RBP16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 TSHZ3Q63HK5 1081 aa16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
SOX2-OT-241ENST00000626948 IGHA2P01877 340 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 MAPK4P31152 587 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 UBE3CQ15386 1083 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 C12orf60Q5U649 245 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 HMX1Q9NP08 348 aaPredicted RBP16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP17L21D6R901 530 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 USP14P54578 494 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 LHX8Q68G74 356 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 SOCS4Q8WXH5 440 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 OGDHLQ9ULD0 1010 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
SOX2-OT-241ENST00000626948 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-241ENST00000626948 CDK8P49336 464 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms