RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.58
TCF4-254ENST00000626584 PLCD1P51178 756 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.58
TCF4-254ENST00000626584 TROAPQ12815 778 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 CFAP100Q494V2 611 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 SBK1Q52WX2 424 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 CCDC93Q567U6 631 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.58
TCF4-254ENST00000626584 CTR9Q6PD62 1173 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 TMTC3Q6ZXV5 915 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 IQCA1Q86XH1 822 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 CSRNP2Q9H175 543 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 CABP5Q9NP86 173 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 INTS13Q9NVM9 706 aa11.46□□□□□ -0.58
TCF4-254ENST00000626584 SPECC1Q5M775 1068 aa11.45□□□□□ -0.58
TCF4-254ENST00000626584 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
TCF4-254ENST00000626584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
TCF4-254ENST00000626584 TMEM139Q8IV31 216 aa11.45□□□□□ -0.58
TCF4-254ENST00000626584 CMTR1Q8N1G2 835 aaKnown RBP11.45□□□□□ -0.58
TCF4-254ENST00000626584 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
TCF4-254ENST00000626584 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
TCF4-254ENST00000626584 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
TCF4-254ENST00000626584 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
TCF4-254ENST00000626584 ZNF215Q9UL58 517 aaPredicted RBP11.45□□□□□ -0.58
TCF4-254ENST00000626584 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
TCF4-254ENST00000626584 CNTNAP5Q8WYK1 1306 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
TCF4-254ENST00000626584 NPY5RQ15761 445 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
TCF4-254ENST00000626584 REXO1L1PQ8IX06 675 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 ZNF397Q8NF99 534 aaPredicted RBP11.44□□□□□ -0.58
TCF4-254ENST00000626584 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 OGFRQ9NZT2 677 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
TCF4-254ENST00000626584 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 TRAPPC10P48553 1259 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 ETF1P62495 437 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 CELF1Q92879 486 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 MED15Q96RN5 788 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 NFE2L3Q9Y4A8 694 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 GOLGA6L9A6NEM1 432 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 USP17L21D6R901 530 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 ADAMTS2O95450 1211 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 RPS8P62241 208 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 ATP2C1P98194 919 aaPredicted RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 NAA30Q147X3 362 aaPredicted RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 NR1I3Q14994 352 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 EARS2Q5JPH6 523 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 TRIM65Q6PJ69 517 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 SYT10Q6XYQ8 523 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 USP49Q70CQ1 688 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
TCF4-254ENST00000626584 NARFQ9UHQ1 456 aa11.43□□□□□ -0.58
TCF4-254ENST00000626584 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 A0A087X0B3 334 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 CYP2D7A0A087X1C5 515 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 A0A0G2JS52 829 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
TCF4-254ENST00000626584 KCNQ2O43526 872 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 STX10O60499 249 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 MECOMQ03112 1051 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 DPYDQ12882 1025 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 CUL4BQ13620 913 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 UTP14CQ5TAP6 766 aaKnown RBP11.42□□□□□ -0.58
TCF4-254ENST00000626584 SPATA1Q5VX52 437 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
TCF4-254ENST00000626584 ANKS1AQ92625 1134 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 PAGE5Q96GU1 130 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 GSDMAQ96QA5 445 aa11.42□□□□□ -0.58
TCF4-254ENST00000626584 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
TCF4-254ENST00000626584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.58
TCF4-254ENST00000626584 RPS6KA4O75676 772 aa11.41□□□□□ -0.58
TCF4-254ENST00000626584 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
TCF4-254ENST00000626584 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
TCF4-254ENST00000626584 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
TCF4-254ENST00000626584 TC2NQ8N9U0 490 aa11.41□□□□□ -0.58
TCF4-254ENST00000626584 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
TCF4-254ENST00000626584 FAM53CQ9NYF3 392 aa11.41□□□□□ -0.58
TCF4-254ENST00000626584 SBF2Q86WG5 1849 aa11.41□□□□□ -0.58
TCF4-254ENST00000626584 PRDM1O75626 825 aa11.4□□□□□ -0.58
TCF4-254ENST00000626584 SCG2P13521 617 aa11.4□□□□□ -0.58
TCF4-254ENST00000626584 ATP2B1P20020 1258 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms