RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 Q3C1V9 767 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 CERKLQ49MI3 558 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-215ENST00000625617 HSP90AB4PQ58FF6 505 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 MORN1Q5T089 497 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP6NLQ92738 828 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 ZMYND8Q9ULU4 1186 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-215ENST00000625617 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-215ENST00000625617 POTEEQ6S8J3 1075 aa17.58■□□□□ 0.4
TUBB3-215ENST00000625617 RIOK1Q9BRS2 568 aaKnown RBP17.58■□□□□ 0.4
TUBB3-215ENST00000625617 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
TUBB3-215ENST00000625617 CABP5Q9NP86 173 aa17.58■□□□□ 0.4
TUBB3-215ENST00000625617 DOCK3Q8IZD9 2030 aa17.58■□□□□ 0.4
TUBB3-215ENST00000625617 PLXNB2O15031 1838 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 MAGEB6P1A0A0J9YX57 407 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
TUBB3-215ENST00000625617 CACNB2Q08289 660 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-215ENST00000625617 CCL14Q16627 93 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 WDR78Q5VTH9 848 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 GDF15Q99988 308 aa17.57■□□□□ 0.4
TUBB3-215ENST00000625617 CRNKL1Q9BZJ0 848 aaKnown RBP17.57■□□□□ 0.4
TUBB3-215ENST00000625617 PFASO15067 1338 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-215ENST00000625617 CNMDO75829 334 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 POLR3DP05423 398 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-215ENST00000625617 PDE6AP16499 860 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 CCND3P30281 292 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-215ENST00000625617 SHMT1P34896 483 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 PLCD1P51178 756 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 RHPN1Q8TCX5 695 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 ACER1Q8TDN7 264 aa17.56■□□□□ 0.4
TUBB3-215ENST00000625617 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
TUBB3-215ENST00000625617 MYO5AQ9Y4I1 1855 aaKnown RBP17.55■□□□□ 0.4
TUBB3-215ENST00000625617 SYN1P17600 705 aa17.55■□□□□ 0.4
TUBB3-215ENST00000625617 BMP8BP34820 402 aa17.55■□□□□ 0.4
TUBB3-215ENST00000625617 SLC9C2Q5TAH2 1124 aa17.55■□□□□ 0.4
TUBB3-215ENST00000625617 LBX2Q6XYB7 198 aa17.55■□□□□ 0.4
TUBB3-215ENST00000625617 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
TUBB3-215ENST00000625617 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
TUBB3-215ENST00000625617 IVNS1ABPQ9Y6Y0 642 aa17.55■□□□□ 0.4
TUBB3-215ENST00000625617 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 SPDYE16A6NNV3 312 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-215ENST00000625617 GABPAQ06546 454 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 MFSD14CQ5VZR4 134 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 KIF1BPQ96EK5 621 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
TUBB3-215ENST00000625617 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
TUBB3-215ENST00000625617 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 SLC15A5A6NIM6 579 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 APBB1O00213 710 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 GOLIM4O00461 696 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
TUBB3-215ENST00000625617 HMMRO75330 724 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 MS4A1P11836 297 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 COL6A1P12109 1028 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 PTPREP23469 700 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 MAGEA10P43363 369 aaPredicted RBP17.53■□□□□ 0.4
TUBB3-215ENST00000625617 SEPT2Q15019 361 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
TUBB3-215ENST00000625617 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
TUBB3-215ENST00000625617 BTBD7Q9P203 1132 aa17.53■□□□□ 0.4
TUBB3-215ENST00000625617 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
TUBB3-215ENST00000625617 GRB14Q14449 540 aa17.52■□□□□ 0.4
TUBB3-215ENST00000625617 LHX8Q68G74 356 aa17.52■□□□□ 0.4
TUBB3-215ENST00000625617 MIER1Q8N108 512 aa17.52■□□□□ 0.4
TUBB3-215ENST00000625617 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.4
TUBB3-215ENST00000625617 MYH1P12882 1939 aa17.52■□□□□ 0.4
TUBB3-215ENST00000625617 HOXC6P09630 235 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 EVX2Q03828 476 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 LCORLQ8N3X6 602 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 DCP1AQ9NPI6 582 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-215ENST00000625617 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
TUBB3-215ENST00000625617 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 MSCO60682 206 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 LRRC26Q2I0M4 334 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-215ENST00000625617 TDHQ8IZJ6 230 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 SLC44A5Q8NCS7 719 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 SWAP70Q9UH65 585 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 DDX20Q9UHI6 824 aaKnown RBP17.5■□□□□ 0.39
TUBB3-215ENST00000625617 DDX19BQ9UMR2 479 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 LAMA3Q16787 3333 aa17.5■□□□□ 0.39
TUBB3-215ENST00000625617 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
TUBB3-215ENST00000625617 CYP2D6P10635 497 aa17.49■□□□□ 0.39
TUBB3-215ENST00000625617 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
TUBB3-215ENST00000625617 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms