RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
USH1C-211ENST00000624811 HMGCRP04035 888 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 POTEEQ6S8J3 1075 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
USH1C-211ENST00000624811 HTATIP2Q9BUP3 242 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 CABP5Q9NP86 173 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 PAK6Q9NQU5 681 aaPredicted RBP16.62■□□□□ 0.25
USH1C-211ENST00000624811 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
USH1C-211ENST00000624811 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
USH1C-211ENST00000624811 CHGBP05060 677 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 ERVK-24P63145 666 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 SEPT2Q15019 361 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
USH1C-211ENST00000624811 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 DIS3LQ8TF46 1054 aaKnown RBP16.61■□□□□ 0.25
USH1C-211ENST00000624811 TRIB2Q92519 343 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 PORCNQ9H237 461 aa16.61■□□□□ 0.25
USH1C-211ENST00000624811 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 PRKAB2O43741 272 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 MBD4O95243 580 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 GUCY1A2P33402 732 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
USH1C-211ENST00000624811 CHMP4BQ9H444 224 aaKnown RBP16.6■□□□□ 0.25
USH1C-211ENST00000624811 CWC22Q9HCG8 908 aaKnown RBP16.6■□□□□ 0.25
USH1C-211ENST00000624811 DCP1AQ9NPI6 582 aaPredicted RBP16.6■□□□□ 0.25
USH1C-211ENST00000624811 ATP5JP18859 108 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 VCAM1P19320 739 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 USP14P54578 494 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 WDR78Q5VTH9 848 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 GPR142Q7Z601 462 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 DYNLL2Q96FJ2 89 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 PAWRQ96IZ0 340 aaKnown RBP16.59■□□□□ 0.25
USH1C-211ENST00000624811 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 CRISPLD2Q9H0B8 497 aa16.59■□□□□ 0.25
USH1C-211ENST00000624811 CNMDO75829 334 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
USH1C-211ENST00000624811 MAPK4P31152 587 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 ADD2P35612 726 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
USH1C-211ENST00000624811 GABPAQ06546 454 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 CCL14Q16627 93 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 CATSPERGQ6ZRH7 1159 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
USH1C-211ENST00000624811 HAUS7Q99871 368 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.24
USH1C-211ENST00000624811 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
USH1C-211ENST00000624811 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
USH1C-211ENST00000624811 RPTORQ8N122 1335 aa16.58■□□□□ 0.24
USH1C-211ENST00000624811 CYP2D7A0A087X1C5 515 aa16.57■□□□□ 0.24
USH1C-211ENST00000624811 A0A1W2PRG0 241 aa16.57■□□□□ 0.24
USH1C-211ENST00000624811 SMIM22K7EJ46 135 aa16.57■□□□□ 0.24
USH1C-211ENST00000624811 ZKSCAN1P17029 563 aaPredicted RBP16.57■□□□□ 0.24
USH1C-211ENST00000624811 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
USH1C-211ENST00000624811 SOCS4Q8WXH5 440 aa16.57■□□□□ 0.24
USH1C-211ENST00000624811 EVI5O60447 810 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 RGS2P41220 211 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 BTBD7Q9P203 1132 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 NR2E3Q9Y5X4 410 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
USH1C-211ENST00000624811 RLFQ13129 1914 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 SPDYE16A6NNV3 312 aaPredicted RBP16.55■□□□□ 0.24
USH1C-211ENST00000624811 AKR1B1P15121 316 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 MORN1Q5T089 497 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
USH1C-211ENST00000624811 SLC4A4Q9Y6R1 1079 aa16.55■□□□□ 0.24
USH1C-211ENST00000624811 XRCC5P13010 732 aaKnown RBP16.54■□□□□ 0.24
USH1C-211ENST00000624811 CCND3P30281 292 aaPredicted RBP16.54■□□□□ 0.24
USH1C-211ENST00000624811 CCNA1P78396 465 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 CACNB2Q08289 660 aaPredicted RBP16.54■□□□□ 0.24
USH1C-211ENST00000624811 KIAA1755Q5JYT7 1200 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
USH1C-211ENST00000624811 USP6NLQ92738 828 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 APBA2Q99767 749 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
USH1C-211ENST00000624811 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 USP17L21D6R901 530 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 MAP2K5Q13163 448 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 MAP3K21Q5TCX8 1036 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms