RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 MAK16Q9BXY0 300 aaKnown RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 BATF3Q9NR55 127 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 ARGLU1Q9NWB6 273 aaPredicted RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 ZNF510Q9Y2H8 683 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 ROR2Q01974 943 aaKnown RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 CCDC150Q8NCX0 1101 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 ALS2CR12Q96Q35 445 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 LRRCC1Q9C099 1032 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 CD248Q9HCU0 757 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
USB1-216ENST00000624720 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 PCDHGC5Q9Y5F6 944 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 ADCY5O95622 1261 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 PAPOLAP51003 745 aaKnown RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.75
USB1-216ENST00000624720 DHX8Q14562 1220 aaKnown RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 LMNTD2Q8IXW0 634 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 SYCP3Q8IZU3 236 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 KIRREL3Q8IZU9 778 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 MYD88Q99836 296 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 C6orf203Q9P0P8 240 aaPredicted RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 SWAP70Q9UH65 585 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 CAMTA1Q9Y6Y1 1673 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 EP400Q96L91 3159 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 CEMIPQ8WUJ3 1361 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 SLC26A4O43511 780 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 RNF8O76064 485 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 GCLCP48506 637 aaPredicted RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 CUL4BQ13620 913 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 VPS53Q5VIR6 699 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 BICD2Q8TD16 824 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 USP44Q9H0E7 712 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 TSPY26PQ9H489 355 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 TMCC3Q9ULS5 477 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 RGS12O14924 1447 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 GNAI2P04899 355 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 MYBPC3Q14896 1274 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 ENOX2Q16206 610 aaKnown RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 COBLL1Q53SF7 1204 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 LCA5Q86VQ0 697 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 CCDC68Q9H2F9 335 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
USB1-216ENST00000624720 PRELID1Q9Y255 219 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 IKBKGQ9Y6K9 419 aa10.36□□□□□ -0.75
USB1-216ENST00000624720 RGPD1P0DJD0 1748 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 TMEM110-MUSTN1A8MSY1 372 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 SRGAP3O43295 1099 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 ALOX15P16050 662 aaPredicted RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 TRIM29Q14134 588 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 CAPRIN2Q6IMN6 1127 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 MAB21L3Q8N8X9 362 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 MPHOSPH6Q99547 160 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 HELLSQ9NRZ9 838 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 KIF1AQ12756 1690 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 LSM1O15116 133 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 NPHP1O15259 732 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 SURF6O75683 361 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 YY1P25490 414 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 USP11P51784 963 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 NUCB1Q02818 461 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 MCTP1Q6DN14 999 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 ISM2Q6H9L7 571 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 ZCCHC8Q6NZY4 707 aaKnown RBP10.35□□□□□ -0.75
USB1-216ENST00000624720 STK11IPQ8N1F8 1099 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
USB1-216ENST00000624720 MTRF1O75570 445 aaKnown RBP10.34□□□□□ -0.75
USB1-216ENST00000624720 ABL1P00519 1130 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 TTLL7Q6ZT98 887 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 PPP1R42Q7Z4L9 355 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 TMCO5AQ8N6Q1 288 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
USB1-216ENST00000624720 GORASP1Q9BQQ3 440 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 MUC3BQ9H195 1237 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 TAOK3Q9H2K8 898 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
USB1-216ENST00000624720 KCNF1Q9H3M0 494 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 LMBRD1Q9NUN5 540 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 QPCTLQ9NXS2 382 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 SLU7O95391 586 aaKnown RBP10.34□□□□□ -0.75
USB1-216ENST00000624720 DESP17661 470 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 C14orf80Q86SX3 495 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms