RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 CCDC173Q0VFZ6 552 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 GNL2Q13823 731 aaKnown RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 NOSTRINQ8IVI9 506 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 DIS3L2Q8IYB7 885 aaKnown RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 FOXP1Q9H334 677 aaPredicted RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 DDX4Q9NQI0 724 aaKnown RBP15.3■□□□□ 0.04
C3orf56-201ENST00000624688 hCG_1642624A0A1W2PR95 340 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 FKBP1AP62942 108 aaKnown RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 AKAP17AQ02040 695 aaKnown RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 SF3B2Q13435 895 aaKnown RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 DACT2Q5SW24 774 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 AXDND1Q5T1B0 1012 aaPredicted RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 FSIP1Q8NA03 581 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 OXER1Q8TDS5 423 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 TOB1P50616 345 aaPredicted RBP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 PICALMQ13492 652 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 SAFBQ15424 915 aaKnown RBP eCLIP15.29■□□□□ 0.04
C3orf56-201ENST00000624688 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 CKAP2LQ8IYA6 745 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 NEDD1Q8NHV4 660 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 VPS54Q9P1Q0 977 aa15.29■□□□□ 0.04
C3orf56-201ENST00000624688 GABPAQ06546 454 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 NR5A1Q13285 461 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 GRM4Q14833 912 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 AOC3Q16853 763 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 FMR1NBQ8N0W7 255 aaPredicted RBP15.28■□□□□ 0.04
C3orf56-201ENST00000624688 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
C3orf56-201ENST00000624688 TMEM47Q9BQJ4 181 aa15.28■□□□□ 0.04
C3orf56-201ENST00000624688 PPP6R2O75170 966 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 KIF5BP33176 963 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 CRKP46108 304 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.04
C3orf56-201ENST00000624688 PDLIM2Q96JY6 352 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.04
C3orf56-201ENST00000624688 A0A1B0GVL5 298 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 C21orf2O43822 256 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
C3orf56-201ENST00000624688 NOVP48745 357 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 TYRO3Q06418 890 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 NPY5RQ15761 445 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 MAD2L2Q9UI95 211 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 PCDHAC2Q9Y5I4 1007 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 VEGFAP15692 232 aaPredicted RBP15.26■□□□□ 0.03
C3orf56-201ENST00000624688 XBP1P17861 261 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 KCNA3P22001 575 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 NDUFA8P51970 172 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
C3orf56-201ENST00000624688 OSBPL5Q9H0X9 879 aaPredicted RBP15.26■□□□□ 0.03
C3orf56-201ENST00000624688 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.26■□□□□ 0.03
C3orf56-201ENST00000624688 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 KIF13BQ9NQT8 1826 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 SCG2P13521 617 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 CMA1P23946 247 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 HDLBPQ00341 1268 aaKnown RBP15.25■□□□□ 0.03
C3orf56-201ENST00000624688 PFKFB3Q16875 520 aaPredicted RBP15.25■□□□□ 0.03
C3orf56-201ENST00000624688 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 STX8Q9UNK0 236 aa15.25■□□□□ 0.03
C3orf56-201ENST00000624688 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
C3orf56-201ENST00000624688 FAM205CA6NFA0 338 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 YDJCA8MPS7 323 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 CTAGE5O15320 804 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 KINO60870 393 aaKnown RBP15.24■□□□□ 0.03
C3orf56-201ENST00000624688 KRT2P35908 639 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 NFIAQ12857 509 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 RILPL1Q5EBL4 403 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 EARS2Q5JPH6 523 aaKnown RBP15.24■□□□□ 0.03
C3orf56-201ENST00000624688 SLC16A10Q8TF71 515 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 CEP95Q96GE4 821 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 PSME4Q14997 1843 aa15.24■□□□□ 0.03
C3orf56-201ENST00000624688 IGKV6D-41A0A0C4DH26 115 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 ZFPM1Q8IX07 1006 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 TTLL6Q8N841 843 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 PCDHB6Q9Y5E3 794 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 SIPA1L1O43166 1804 aa15.23■□□□□ 0.03
C3orf56-201ENST00000624688 MYH8P13535 1937 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms