RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 TMTC2Q8N394 836 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 ZSCAN10Q96SZ4 725 aaPredicted RBP12.08□□□□□ -0.48
ATRX-216ENST00000624403 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 ADAM33Q9BZ11 813 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
ATRX-216ENST00000624403 USP40Q9NVE5 1235 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
ATRX-216ENST00000624403 NID2Q14112 1375 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 ZNF646O15015 1829 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 FDPSP14324 419 aaKnown RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 CDC27P30260 824 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 PLCD1P51178 756 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 HDLBPQ00341 1268 aaKnown RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 FOXD4L6Q3SYB3 417 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 DDX60LQ5H9U9 1706 aaKnown RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 FOXD4L3Q6VB84 417 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 ENAHQ8N8S7 591 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 ZDHHC15Q96MV8 337 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
ATRX-216ENST00000624403 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
ATRX-216ENST00000624403 COL4A5P29400 1685 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 CPLX1O14810 134 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
ATRX-216ENST00000624403 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
ATRX-216ENST00000624403 NT5C2P49902 561 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 PICALMQ13492 652 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
ATRX-216ENST00000624403 LMBRD1Q9NUN5 540 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 ORC3Q9UBD5 711 aaPredicted RBP12.06□□□□□ -0.48
ATRX-216ENST00000624403 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
ATRX-216ENST00000624403 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 H3BQV1 296 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 TK2O00142 265 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 NMT2O60551 498 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
ATRX-216ENST00000624403 CDKL5O76039 1030 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 RCAN1P53805 252 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 TFAP4Q01664 338 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 RESTQ13127 1097 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 RTN1Q16799 776 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
ATRX-216ENST00000624403 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 CPLX2Q6PUV4 134 aaKnown RBP12.05□□□□□ -0.48
ATRX-216ENST00000624403 C16orf86Q6ZW13 317 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 ATP6V1DQ9Y5K8 247 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 CDK5RAP2Q96SN8 1893 aa12.05□□□□□ -0.48
ATRX-216ENST00000624403 RAD17O75943 681 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 RASA1P20936 1047 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 PTPREP23469 700 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 IARSP41252 1262 aaKnown RBP12.04□□□□□ -0.48
ATRX-216ENST00000624403 CDK8P49336 464 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
ATRX-216ENST00000624403 E2F4Q16254 413 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 NTRK3Q16288 839 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 SKOR2Q2VWA4 1001 aaPredicted RBP12.04□□□□□ -0.48
ATRX-216ENST00000624403 RSBN1LQ6PCB5 846 aaPredicted RBP12.04□□□□□ -0.48
ATRX-216ENST00000624403 NIM1KQ8IY84 436 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 ZNF444Q8N0Y2 327 aaPredicted RBP12.04□□□□□ -0.48
ATRX-216ENST00000624403 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
ATRX-216ENST00000624403 FOCADQ5VW36 1801 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 PSMD14O00487 310 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 HRO43593 1189 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 VIL1P09327 827 aaKnown RBP12.03□□□□□ -0.48
ATRX-216ENST00000624403 GUCY1B3Q02153 619 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 DNM1Q05193 864 aaKnown RBP12.03□□□□□ -0.48
ATRX-216ENST00000624403 NFIAQ12857 509 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 FANCBQ8NB91 859 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 PHKBQ93100 1093 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 GMLQ99445 158 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
ATRX-216ENST00000624403 TAOK3Q9H2K8 898 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 ZNF287Q9HBT7 754 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms