RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 GOLGA8FQ08AF8 430 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 GOLGA8DPQ0D2H9 430 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 FAM207AQ9NSI2 230 aaPredicted RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 RBM28Q9NW13 759 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 NKIRAS1Q9NYS0 192 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 STIM2Q9P246 746 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 MTUS1Q9ULD2 1270 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 ADAMTS13Q76LX8 1427 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 E7EVH7 732 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 GCKRQ14397 625 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 SLC9C1Q4G0N8 1177 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 INTS8Q75QN2 995 aaKnown RBP6.28□□□□□ -1.4
ERCC6-213ENST00000624341 SIRT1Q96EB6 747 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 PDE11AQ9HCR9 933 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 PPANQ9NQ55 473 aaKnown RBP6.28□□□□□ -1.4
ERCC6-213ENST00000624341 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ZAP70P43403 619 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 LIG3P49916 1009 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 GNGT1P63211 74 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 TYW1BQ6NUM6 668 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 CMTR1Q8N1G2 835 aaKnown RBP6.28□□□□□ -1.4
ERCC6-213ENST00000624341 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 CLIC6Q96NY7 704 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 UIMC1Q96RL1 719 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 NLRC4Q9NPP4 1024 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 VPS54Q9P1Q0 977 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF521Q96K83 1311 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 RGS12O14924 1447 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ITGA6P23229 1130 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 PCK1P35558 622 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ATP6V1AP38606 617 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ARHGAP25P42331 645 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 USP37Q86T82 979 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC65Q8IXS2 484 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 NUP58Q9BVL2 599 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 BAIAP2L1Q9UHR4 511 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 CAPN7Q9Y6W3 813 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 SPOPO43791 374 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 ATP5JP18859 108 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 PAK2Q13177 524 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 TDRD7Q8NHU6 1098 aaKnown RBP6.28□□□□□ -1.4
ERCC6-213ENST00000624341 BCAS4Q8TDM0 211 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 IP6K1Q92551 441 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 DCAF5Q96JK2 942 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 TCHPQ9BT92 498 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 NEXMIFQ5QGS0 1516 aa6.28□□□□□ -1.4
ERCC6-213ENST00000624341 A6NNZ2 444 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 CCNT1O60563 726 aaKnown RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 BUB1BO60566 1050 aaPredicted RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 RPL13P26373 211 aaKnown RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 TUBB8Q3ZCM7 444 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 SEL1L2Q5TEA6 688 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 C2CD5Q86YS7 1000 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 OR8K1Q8NGG5 319 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 PPP1R13BQ96KQ4 1090 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 PSMD1Q99460 953 aa6.27□□□□□ -1.4
ERCC6-213ENST00000624341 IFIH1Q9BYX4 1025 aaKnown RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 LSG1Q9H089 658 aaKnown RBP6.27□□□□□ -1.4
ERCC6-213ENST00000624341 ACTN4O43707 911 aaKnown RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TNFAIP3P21580 790 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 KRT71Q3SY84 523 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 C11orf57Q6ZUT1 292 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 RRAGAQ7L523 313 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 EEF2KMTQ96G04 330 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TBC1D7Q9P0N9 293 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 UTP11Q9Y3A2 253 aaKnown RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 CLIC4Q9Y696 253 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PFKFB2O60825 505 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 A1BGP04217 495 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 HOXB7P09629 217 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 CMA1P23946 247 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 MAP2K2P36507 400 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 RAD51AP2Q09MP3 1159 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 WHAMMP3Q1A5X7 153 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 SPATA24Q86W54 205 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PPFIBP2Q8ND30 876 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TTC16Q8NEE8 873 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TSNARE1Q96NA8 513 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 FTOQ9C0B1 505 aaKnown RBP eCLIP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ZBTB21Q9ULJ3 1066 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 SSH2Q76I76 1423 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 YTHDC2Q9H6S0 1430 aaKnown RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PSDA5PKW4 1024 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 KCNQ3O43525 872 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TAF5LO75529 589 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PARP1P09874 1014 aaKnown RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ALDH3A1P30838 453 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PPP1R2P41236 205 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms