RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 CCDC94Q9BW85 323 aaPredicted RBP21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 USP40Q9NVE5 1235 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 KCNJ14Q9UNX9 436 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 CRKP46108 304 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 PPP2R5BQ15173 497 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 TRIM22Q8IYM9 498 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 TEKT1Q969V4 418 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 ZBTB7AO95365 584 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 DEXIO95424 95 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 U2AF2P26368 475 aaKnown RBP eCLIP21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 TMTC3Q6ZXV5 915 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 SRBD1Q8N5C6 995 aaKnown RBP21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 ANKS1AQ92625 1134 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 NFIAQ12857 509 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 DGKHQ86XP1 1220 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 RNF26Q9BY78 433 aaPredicted RBP21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 TCP11L1Q9NUJ3 509 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 COL4A5P29400 1685 aa21.36■■□□□ 1.01
PCDHB2-202ENST00000622947 CALM1P0DP23 149 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 CALM2P0DP24 149 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 CALM3P0DP25 149 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 CC2D2BQ6DHV5 1058 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 SASS6Q6UVJ0 657 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 LINC00301Q8NCQ3 95 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 NR1I2O75469 434 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 MMP1P03956 469 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 SLURP2P0DP57 97 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 FKBP1AP62942 108 aaKnown RBP21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 GABPAQ06546 454 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 ZFPM1Q8IX07 1006 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 ZDHHC15Q96MV8 337 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 RBM28Q9NW13 759 aaKnown RBP21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 DACT1Q9NYF0 836 aa21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 V9GY48 417 aaPredicted RBP21.35■■□□□ 1.01
PCDHB2-202ENST00000622947 GOLGA6L4A6NEF3 574 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 BTBD18B2RXH4 712 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 PPIP5K2O43314 1243 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 PNMA1Q8ND90 353 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 WASF1Q92558 559 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 CNTNAP5Q8WYK1 1306 aa21.34■■□□□ 1.01
PCDHB2-202ENST00000622947 PRPF3O43395 683 aaKnown RBP21.33■■□□□ 1.01
PCDHB2-202ENST00000622947 TRIM29Q14134 588 aa21.33■■□□□ 1.01
PCDHB2-202ENST00000622947 GOLPH3LQ9H4A5 285 aa21.33■■□□□ 1.01
PCDHB2-202ENST00000622947 POLR3EQ9NVU0 708 aa21.33■■□□□ 1.01
PCDHB2-202ENST00000622947 CACNB3P54284 484 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 STAG2Q8N3U4 1231 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 OXER1Q8TDS5 423 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 PDLIM2Q96JY6 352 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 PCDHA7Q9UN72 937 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 ATF5Q9Y2D1 282 aaPredicted RBP21.33■■□□□ 1
PCDHB2-202ENST00000622947 PSME4Q14997 1843 aa21.33■■□□□ 1
PCDHB2-202ENST00000622947 MYH8P13535 1937 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 ZSCAN20P17040 1043 aaPredicted RBP21.32■■□□□ 1
PCDHB2-202ENST00000622947 NT5C2P49902 561 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 BICD2Q8TD16 824 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 TMEM47Q9BQJ4 181 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
PCDHB2-202ENST00000622947 KAT14Q9H8E8 782 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 CAMK4Q16566 473 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 SLC35G1Q2M3R5 365 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 DIS3L2Q8IYB7 885 aaKnown RBP21.32■■□□□ 1
PCDHB2-202ENST00000622947 NEDD1Q8NHV4 660 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 CTCFLQ8NI51 663 aaPredicted RBP21.32■■□□□ 1
PCDHB2-202ENST00000622947 FUCA2Q9BTY2 467 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 MRIQ9BWK5 157 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 VPS54Q9P1Q0 977 aa21.32■■□□□ 1
PCDHB2-202ENST00000622947 SIPA1L1O43166 1804 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 NR5A1Q13285 461 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 CCDC93Q567U6 631 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 ANO1Q5XXA6 986 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 STX8Q9UNK0 236 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 ZKSCAN5Q9Y2L8 839 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 ME1P48163 572 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 CEP95Q96GE4 821 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 MAP3K14Q99558 947 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 ZNF287Q9HBT7 754 aa21.31■■□□□ 1
PCDHB2-202ENST00000622947 ZNF277Q9NRM2 450 aaPredicted RBP21.31■■□□□ 1
PCDHB2-202ENST00000622947 TSPY26PQ9H489 355 aa21.3■■□□□ 1
PCDHB2-202ENST00000622947 MAD2L2Q9UI95 211 aa21.3■■□□□ 1
PCDHB2-202ENST00000622947 YEATS4O95619 227 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 SNW1Q13573 536 aaKnown RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 SF3A1Q15459 793 aaKnown RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 NOSTRINQ8IVI9 506 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 CCAR1Q8IX12 1150 aaKnown RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 PSMD1Q99460 953 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 NOVP48745 357 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 STK38Q15208 465 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 PTPAQ15257 358 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms