RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 AKR1B1P15121 316 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 MAP3K10Q02779 954 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 RAB3GAP1Q15042 981 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
CLTCL1-212ENST00000622493 PTPDC1A2A3K4 754 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 RTN1Q16799 776 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 GREB1LQ9C091 1923 aaPredicted RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 RXRAP19793 462 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 CDC27P30260 824 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 PNMA1Q8ND90 353 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 PITPNM2Q9BZ72 1349 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 DEFB129Q9H1M3 183 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
CLTCL1-212ENST00000622493 JAK2O60674 1132 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 TTLL1O95922 423 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 IFNAR1P17181 557 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 SYT1P21579 422 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 NTRK3Q16288 839 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 ANGEL2Q5VTE6 544 aaKnown RBP16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
CLTCL1-212ENST00000622493 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 STX6O43752 255 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 BRD1O95696 1058 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 KIF5BP33176 963 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 ABCB5Q2M3G0 1257 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 CCDC144CPQ8IYA2 1237 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 RGS22Q8NE09 1264 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
CLTCL1-212ENST00000622493 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 SLURP2P0DP57 97 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 PKP1Q13835 747 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 DDX11Q96FC9 970 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 NYAP2Q9P242 653 aa16.56■□□□□ 0.24
CLTCL1-212ENST00000622493 IQCA1LA6NCM1 817 aa16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 GNAQP50148 359 aa16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 MKL1Q969V6 931 aa16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
CLTCL1-212ENST00000622493 SCN4AP35499 1836 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 GRM4Q14833 912 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 WASF1Q92558 559 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 GINM1Q9NU53 330 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 SYNPO2Q9UMS6 1093 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
CLTCL1-212ENST00000622493 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 LZTS2Q9BRK4 669 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 GDF11O95390 407 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 GH2P01242 217 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 EPHX2P34913 555 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 CAP2P40123 477 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 ICA1Q05084 483 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-212ENST00000622493 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 DTNBO60941 627 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 DEXIO95424 95 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 SEPT2Q15019 361 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms