RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TAX1BP1Q86VP1 789 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 PARP9Q8IXQ6 854 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 NBPF15Q8N660 670 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 C3orf20Q8ND61 904 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 TAOK2Q9UL54 1235 aa8.45□□□□□ -1.06
TRIM49B-202ENST00000622138 PKD1L3Q7Z443 1732 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 MST1RQ04912 1400 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 MAST3O60307 1309 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CTAGE15A4D2H0 777 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 GOLGA8KD6RF30 607 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CTAGE8P0CG41 777 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 TATP17735 454 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 ABCD1P33897 745 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CD151P48509 253 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 GNGT1P63211 74 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 FANCCQ00597 558 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 EXOSC10Q01780 885 aaKnown RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 STIM1Q13586 685 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 SPDYE1Q8NFV5 336 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CABLES1Q8TDN4 633 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 SH3GL2Q99962 352 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 ERICH2A1L162 156 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 SRRM3A6NNA2 597 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 M0R2C6 588 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 NDUFAB1O14561 156 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 FOXP2O15409 715 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 TIMM10P62072 90 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CAPRIN2Q6IMN6 1127 aaKnown RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 NAA16Q6N069 864 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 DHX32Q7L7V1 743 aaKnown RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CEP57Q86XR8 500 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 VSTM4Q8IW00 320 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 FAM177A1Q8N128 213 aaPredicted RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC47Q96A33 483 aaKnown RBP8.44□□□□□ -1.06
TRIM49B-202ENST00000622138 E7EWF7 191 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 PEX19P40855 299 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 CWF19L1Q69YN2 538 aaKnown RBP8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 ATL3Q6DD88 541 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 CYB5D1Q6P9G0 228 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 SPATA21Q7Z572 469 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 IFNL2Q8IZJ0 200 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 ENGASEQ8NFI3 743 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 PLBD2Q8NHP8 589 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 AGXT2Q9BYV1 514 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 RCOR1Q9UKL0 485 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 CORO1CQ9ULV4 474 aaPredicted RBP8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
TRIM49B-202ENST00000622138 FRMD3A2A2Y4 597 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 FAM163BP0C2L3 166 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 HSPD1P10809 573 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 FDPSP14324 419 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 KCNB1Q14721 858 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 OTUD7BQ6GQQ9 843 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 SDCCAG8Q86SQ7 713 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 FBXW7Q969H0 707 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 LLPHQ9BRT6 129 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 IRX2Q9BZI1 471 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 PUF60Q9UHX1 559 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 NEDD4P46934 1319 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 CARMIL3Q8ND23 1372 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 TARSL2A2RTX5 802 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 PDLIM1O00151 329 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 KIF5CO60282 957 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 SKAP2O75563 359 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 RHOXF2BP0C7M4 288 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 CSB-PGBD3P0DP91 1061 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 FERP16591 822 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 PDIA3P30101 505 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 GCLCP48506 637 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 ROR2Q01974 943 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 LAMB3Q13751 1172 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 NCAPHQ15003 741 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 MIS18BP1Q6P0N0 1132 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 SLC30A9Q6PML9 568 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 RAB11FIP4Q86YS3 637 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms