RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 Q6ZUG5 572 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 G2E3Q7L622 706 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 MRFAP1L1Q96HT8 127 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 CAPN7Q9Y6W3 813 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 PTCH1Q13635 1447 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 N4BP3O15049 544 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 GPAA1O43292 621 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 TACC1O75410 805 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 SH3BGRP55822 239 aaPredicted RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 TCP10Q12799 353 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 GADL1Q6ZQY3 521 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 PSMA7O14818 248 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 DEXIO95424 95 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 KARSQ15046 597 aaKnown RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 RPL13P26373 211 aaKnown RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 SLC8A3P57103 927 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 CHRNDQ07001 517 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 TTLL7Q6ZT98 887 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 ATP5JP18859 108 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 AK2P54819 239 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 DTHD1Q6ZMT9 781 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 MAPKAPK5Q8IW41 473 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 FBXO18Q8NFZ0 1043 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 PIGBQ92521 554 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 LZTFL1Q9NQ48 299 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 RAD51AP2Q09MP3 1159 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 KCTD2Q14681 263 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
COL25A1-209ENST00000622134 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
COL25A1-209ENST00000622134 SNX16P57768 344 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 MYL5Q02045 173 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 FAM160A1Q05DH4 1040 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CNGA4Q8IV77 575 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 LRRC8AQ8IWT6 810 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 MIPOL1Q8TD10 442 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 TTC14Q96N46 770 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 SPTLC3Q9NUV7 552 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 GOLGA6BA6NDN3 693 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 PABPN1LA6NDY0 278 aaKnown RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CDC25BP30305 580 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 PPP2R5AQ15172 486 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 RRAGBQ5VZM2 374 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 NECAB1Q8N987 351 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 RABGGTAQ92696 567 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 TACO1Q9BSH4 297 aaKnown RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 SYNCQ9H7C4 482 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ERCC3P19447 782 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 LIG3P49916 1009 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ATP11AP98196 1134 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CABS1Q96KC9 395 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 VCXQ9H320 206 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 ATP8A2Q9NTI2 1148 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
COL25A1-209ENST00000622134 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 PPFIA3O75145 1194 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 NR1I2O75469 434 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 ADCY7P51828 1080 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 PRDM4Q9UKN5 801 aa11.65□□□□□ -0.55
COL25A1-209ENST00000622134 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 PLCD1P51178 756 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 CCDC65Q8IXS2 484 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 SLC10A4Q96EP9 437 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 RPGRIP1Q96KN7 1286 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 ANGEL1Q9UNK9 670 aaKnown RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 PDE8BO95263 885 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 CTNNA2P26232 953 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 HOXD10P28358 340 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 ASIC1P78348 528 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 TRIM47Q96LD4 638 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 SUDS3Q9H7L9 328 aaPredicted RBP11.64□□□□□ -0.55
COL25A1-209ENST00000622134 YY1AP1Q9H869 796 aa11.64□□□□□ -0.55
COL25A1-209ENST00000622134 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms