RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 C5orf42Q9H799 3197 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 A0A1W2PQ45 241 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 A0A1W2PQY0 241 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 DDTLA6NHG4 134 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L15C9J2P7 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L13C9JLJ4 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L11C9JVI0 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L18D6R9N7 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L22D6RA61 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L17D6RBQ6 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L19D6RCP7 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L20D6RJB6 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ARVCFO00192 962 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 RFXAPO00287 272 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 TLR3O15455 904 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 PLIN1O60240 522 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 LPXNO60711 386 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CD4P01730 458 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 PFKMP08237 780 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ASNSP08243 561 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ACRP10323 421 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 RARBP10826 455 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ATP2A2P16615 1042 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 AVPR2P30518 371 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 DSG3P32926 999 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 NBL1P41271 181 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 TMPOP42166 694 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 RGS3P49796 1198 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ACLYP53396 1101 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 NKX3-2P78367 333 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 FOXO4P98177 505 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 TAP1Q03518 808 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L24Q0WX57 530 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 GRB10Q13322 594 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 PUM1Q14671 1186 aaKnown RBP eCLIP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 COL19A1Q14993 1142 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 KRT24Q2M2I5 525 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CCDC30Q5VVM6 783 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 PTCRAQ6ISU1 281 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SAMD1Q6SPF0 538 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 TRIM67Q6ZTA4 783 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SH3BP5LQ7L8J4 393 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 UBE3BQ7Z3V4 1068 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ADHFE1Q8IWW8 467 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 ZSCAN29Q8IWY8 852 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SUGP1Q8IWZ8 645 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SLF2Q8IX21 1173 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 MICALL1Q8N3F8 863 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 FBXL6Q8N531 539 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 PCSK9Q8NBP7 692 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SHCBP1Q8NEM2 672 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 KLHDC9Q8NEP7 349 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 LINS1Q8NG48 757 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 NPLOC4Q8TAT6 608 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 GLT1D1Q96MS3 346 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 POP1Q99575 1024 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SEMA4AQ9H3S1 761 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 MYH16Q9H6N6 1097 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CWC22Q9HCG8 908 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 XPNPEP3Q9NQH7 507 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 STARD7Q9NQZ5 370 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CNNM1Q9NRU3 951 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CTNNA3Q9UI47 895 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 HERC5Q9UII4 1024 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 DIS3Q9Y2L1 958 aaKnown RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 SIPA1L3O60292 1781 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CHD6Q8TD26 2715 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 TRANK1O15050 2925 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 BAHCC1Q9P281 2608 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 CHD7Q9P2D1 2997 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 LAMB4A4D0S4 1761 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MROH5Q6ZUA9 1318 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MAPK8IP3Q9UPT6 1336 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CACNA1HO95180 2353 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 TPRP12270 2363 aaKnown RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 DDX60Q8IY21 1712 aaKnown RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 MED19A0JLT2 244 aaPredicted RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 PRR23AA6NEV1 266 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 TMEM221A6NGB7 291 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 M0R296 226 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ADAMTS4O75173 837 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CNMDO75829 334 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CABYRO75952 493 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 PDE8BO95263 885 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CA3P07451 260 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF853P0CG23 659 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MYOGP15173 224 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 IL9P15248 144 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 KCNA5P22460 613 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CST5P28325 142 aaPredicted RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 RABGGTBP53611 331 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ZP2Q05996 745 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CHAF1AQ13111 956 aaPredicted RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 ACAP1Q15027 740 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 KCNA10Q16322 511 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CWF19L2Q2TBE0 894 aaKnown RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 PRAMEF19Q5SWL8 479 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MCTP2Q6DN12 878 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L2Q6R6M4 530 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 LMBR1LQ6UX01 489 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms