RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CDC37L1Q7L3B6 337 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 CATIPQ7Z7H3 387 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 H7C1D1 291 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 HIRAP54198 1017 aaPredicted RBP18.58■□□□□ 0.57
CBWD3-216ENST00000621396 RTN1Q16799 776 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 FAM151AQ8WW52 585 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 PIBF1Q8WXW3 757 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 TMEM47Q9BQJ4 181 aa18.58■□□□□ 0.57
CBWD3-216ENST00000621396 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.57
CBWD3-216ENST00000621396 BRD1O95696 1058 aa18.58■□□□□ 0.56
CBWD3-216ENST00000621396 NTRK3Q16288 839 aa18.58■□□□□ 0.56
CBWD3-216ENST00000621396 PNMA1Q8ND90 353 aa18.58■□□□□ 0.56
CBWD3-216ENST00000621396 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
CBWD3-216ENST00000621396 FZD1Q9UP38 647 aa18.58■□□□□ 0.56
CBWD3-216ENST00000621396 PLEKHA8P1O95397 391 aa18.57■□□□□ 0.56
CBWD3-216ENST00000621396 CERKLQ49MI3 558 aaPredicted RBP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 ANGEL2Q5VTE6 544 aaKnown RBP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 LRRC47Q8N1G4 583 aaKnown RBP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 MTA3Q9BTC8 594 aa18.57■□□□□ 0.56
CBWD3-216ENST00000621396 EHD4Q9H223 541 aa18.57■□□□□ 0.56
CBWD3-216ENST00000621396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
CBWD3-216ENST00000621396 SWAP70Q9UH65 585 aa18.57■□□□□ 0.56
CBWD3-216ENST00000621396 MTMR6Q9Y217 621 aa18.57■□□□□ 0.56
CBWD3-216ENST00000621396 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 SOCS7O14512 581 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
CBWD3-216ENST00000621396 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
CBWD3-216ENST00000621396 GOLGA8HP0CJ92 632 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 GUCY1A2P33402 732 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 DGKHQ86XP1 1220 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 SLC26A6Q9BXS9 759 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 CPVLQ9H3G5 476 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
CBWD3-216ENST00000621396 NBPF11Q86T75 865 aa18.55■□□□□ 0.56
CBWD3-216ENST00000621396 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
CBWD3-216ENST00000621396 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
CBWD3-216ENST00000621396 RAD21O60216 631 aa18.55■□□□□ 0.56
CBWD3-216ENST00000621396 FOXP4Q8IVH2 680 aaPredicted RBP18.55■□□□□ 0.56
CBWD3-216ENST00000621396 MTMR4Q9NYA4 1195 aa18.55■□□□□ 0.56
CBWD3-216ENST00000621396 SEPT2Q15019 361 aa18.54■□□□□ 0.56
CBWD3-216ENST00000621396 DEFB129Q9H1M3 183 aa18.54■□□□□ 0.56
CBWD3-216ENST00000621396 TCP11L1Q9NUJ3 509 aa18.54■□□□□ 0.56
CBWD3-216ENST00000621396 ZSCAN22P10073 491 aaPredicted RBP18.54■□□□□ 0.56
CBWD3-216ENST00000621396 TATDN1Q6P1N9 297 aa18.54■□□□□ 0.56
CBWD3-216ENST00000621396 GGA3Q9NZ52 723 aa18.54■□□□□ 0.56
CBWD3-216ENST00000621396 GH2P01242 217 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 USP17L2Q6R6M4 530 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 PGAP2Q9UHJ9 254 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 WDR33Q9C0J8 1336 aaKnown RBP18.53■□□□□ 0.56
CBWD3-216ENST00000621396 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
CBWD3-216ENST00000621396 H3BQV1 296 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 HMGN5P82970 282 aaKnown RBP18.53■□□□□ 0.56
CBWD3-216ENST00000621396 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 CCDC84Q86UT8 332 aaPredicted RBP18.53■□□□□ 0.56
CBWD3-216ENST00000621396 FAM83AQ86UY5 434 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
CBWD3-216ENST00000621396 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.56
CBWD3-216ENST00000621396 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
CBWD3-216ENST00000621396 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.56
CBWD3-216ENST00000621396 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.55
CBWD3-216ENST00000621396 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.55
CBWD3-216ENST00000621396 NBPF12Q5TAG4 269 aaPredicted RBP18.52■□□□□ 0.55
CBWD3-216ENST00000621396 FKBP1CQ5VVH2 108 aa18.52■□□□□ 0.55
CBWD3-216ENST00000621396 MCTP1Q6DN14 999 aa18.52■□□□□ 0.55
CBWD3-216ENST00000621396 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.55
CBWD3-216ENST00000621396 IGKV6D-41A0A0C4DH26 115 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 VEGFAP15692 232 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 USP17L5A8MUK1 530 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 DDAH1O94760 285 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 F13A1P00488 732 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 IFNAR1P17181 557 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 SSRP1Q08945 709 aaKnown RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 SIAH1Q8IUQ4 282 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 ANKS1AQ92625 1134 aa18.51■□□□□ 0.55
CBWD3-216ENST00000621396 V9GY48 417 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-216ENST00000621396 TTLL1O95922 423 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 MYH8P13535 1937 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 EEF2P13639 858 aaKnown RBP18.5■□□□□ 0.55
CBWD3-216ENST00000621396 PDCP20941 246 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 TNNI2P48788 182 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-216ENST00000621396 MAD2L2Q9UI95 211 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-216ENST00000621396 MCM4P33991 863 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 FUT2Q10981 343 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 PRKG1Q13976 671 aa18.5■□□□□ 0.55
CBWD3-216ENST00000621396 CDKL5O76039 1030 aa18.49■□□□□ 0.55
CBWD3-216ENST00000621396 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms