RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 MBD4O95243 580 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 SGPL1O95470 568 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 CYP2B6P20813 491 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 SEPT2Q15019 361 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 PORCNQ9H237 461 aa13.76□□□□□ -0.21
LINC00649-218ENST00000620580 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 H0YGN5 161 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
LINC00649-218ENST00000620580 CNMDO75829 334 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 ERVK-9P63128 1117 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 ERVK-24P63145 666 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 TSHZ3Q63HK5 1081 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 DPF3Q92784 378 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 C12orf42Q96LP6 360 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 NAV1Q8NEY1 1877 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 PLXNB2O15031 1838 aa13.75□□□□□ -0.21
LINC00649-218ENST00000620580 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 VCAM1P19320 739 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 HABP4Q5JVS0 413 aaKnown RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 CATSPERGQ6ZRH7 1159 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 CLEC10AQ8IUN9 316 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 KIAA1683Q9H0B3 1180 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 DCTPP1Q9H773 170 aa13.74□□□□□ -0.21
LINC00649-218ENST00000620580 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 BAZ2AQ9UIF9 1905 aaKnown RBP13.74□□□□□ -0.21
LINC00649-218ENST00000620580 HMGCRP04035 888 aa13.73□□□□□ -0.21
LINC00649-218ENST00000620580 AKR1B1P15121 316 aa13.73□□□□□ -0.21
LINC00649-218ENST00000620580 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
LINC00649-218ENST00000620580 TRIB2Q92519 343 aa13.73□□□□□ -0.21
LINC00649-218ENST00000620580 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00649-218ENST00000620580 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
LINC00649-218ENST00000620580 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 USP17L21D6R901 530 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 USP14P54578 494 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 UBE3CQ15386 1083 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 CCL14Q16627 93 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 GPR142Q7Z601 462 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 USP6NLQ92738 828 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 GCC1Q96CN9 775 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00649-218ENST00000620580 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
LINC00649-218ENST00000620580 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 BTBD7Q9P203 1132 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 SLC4A4Q9Y6R1 1079 aa13.72□□□□□ -0.21
LINC00649-218ENST00000620580 RANBP2P49792 3224 aaKnown RBP13.71□□□□□ -0.21
LINC00649-218ENST00000620580 MAPK4P31152 587 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 MORN1Q5T089 497 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 PLEKHH3Q7Z736 793 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 CCAR1Q8IX12 1150 aaKnown RBP13.71□□□□□ -0.21
LINC00649-218ENST00000620580 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.21
LINC00649-218ENST00000620580 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.21
LINC00649-218ENST00000620580 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 RABGAP1Q9Y3P9 1069 aa13.71□□□□□ -0.21
LINC00649-218ENST00000620580 RPTORQ8N122 1335 aa13.7□□□□□ -0.22
LINC00649-218ENST00000620580 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
LINC00649-218ENST00000620580 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
LINC00649-218ENST00000620580 CDK8P49336 464 aa13.7□□□□□ -0.22
LINC00649-218ENST00000620580 CTR9Q6PD62 1173 aa13.7□□□□□ -0.22
LINC00649-218ENST00000620580 OTUD7AQ8TE49 926 aaPredicted RBP13.7□□□□□ -0.22
LINC00649-218ENST00000620580 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
LINC00649-218ENST00000620580 HMX1Q9NP08 348 aaPredicted RBP13.7□□□□□ -0.22
LINC00649-218ENST00000620580 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
LINC00649-218ENST00000620580 MYH7P12883 1935 aa13.7□□□□□ -0.22
LINC00649-218ENST00000620580 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
LINC00649-218ENST00000620580 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 TMEM179Q6ZVK1 233 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 SPICE1Q8N0Z3 855 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 SOCS4Q8WXH5 440 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 STRBPQ96SI9 672 aaKnown RBP13.69□□□□□ -0.22
LINC00649-218ENST00000620580 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
LINC00649-218ENST00000620580 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
LINC00649-218ENST00000620580 RGS2P41220 211 aa13.68□□□□□ -0.22
LINC00649-218ENST00000620580 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
LINC00649-218ENST00000620580 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
LINC00649-218ENST00000620580 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
LINC00649-218ENST00000620580 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
LINC00649-218ENST00000620580 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms