RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	USP17L2	Q6R6M4	530 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	POTEE	Q6S8J3	1075 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	MAMSTR	Q6ZN01	415 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	NECAB2	Q7Z6G3	386 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	SLC39A7	Q92504	469 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	FEZ1	Q99689	392 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	NUDT12	Q9BQG2	462 aa		10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	CWC22	Q9HCG8	908 aa	Known RBP	10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.66	□□□□□ -0.7
TARDBP-222	ENST00000620505	FOCAD	Q5VW36	1801 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	ATMIN	O43313	823 aa	Predicted RBP	10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	POLR3D	P05423	398 aa	Predicted RBP	10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	SYN1	P17600	705 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	ERVK-9	P63128	1117 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	ERVK-24	P63145	666 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	PDE3A	Q14432	1141 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	CCL14	Q16627	93 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	WDR78	Q5VTH9	848 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	ACER1	Q8TDN7	264 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	DNAJC2	Q99543	621 aa	Known RBP	10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	SERPINB13	Q9UIV8	391 aa		10.65	□□□□□ -0.7
TARDBP-222	ENST00000620505	PLXNB2	O15031	1838 aa		10.65	□□□□□ -0.71
TARDBP-222	ENST00000620505	DOCK3	Q8IZD9	2030 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	MAGEB6P1	A0A0J9YX57	407 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	ZKSCAN1	P17029	563 aa	Predicted RBP	10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	PLCD1	P51178	756 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	ABCB5	Q2M3G0	1257 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	CERKL	Q49MI3	558 aa	Predicted RBP	10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	TATDN1	Q6P1N9	297 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	GPR142	Q7Z601	462 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	PLEKHH3	Q7Z736	793 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	TTC6	Q86TZ1	520 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	ERC1	Q8IUD2	1116 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	RHPN1	Q8TCX5	695 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	EDC3	Q96F86	508 aa	Known RBP	10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	RIOK1	Q9BRS2	568 aa	Known RBP	10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	PRO3102	Q9H379	93 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	GINM1	Q9NU53	330 aa		10.64	□□□□□ -0.71
TARDBP-222	ENST00000620505	MYH1	P12882	1939 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L15	C9J2P7	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L13	C9JLJ4	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L11	C9JVI0	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L18	D6R9N7	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L22	D6RA61	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L17	D6RBQ6	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L19	D6RCP7	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L20	D6RJB6	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	GOLIM4	O00461	696 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	MPHOSPH10	O00566	681 aa	Known RBP	10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	CNMD	O75829	334 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	CYP2D6	P10635	497 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	PDE6A	P16499	860 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	CCND3	P30281	292 aa	Predicted RBP	10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	MAPK4	P31152	587 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	SHMT1	P34896	483 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	MNX1	P50219	401 aa	Predicted RBP	10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	CACNB2	Q08289	660 aa	Predicted RBP	10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP17L24	Q0WX57	530 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	SLFNL1	Q499Z3	407 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	SLC9C2	Q5TAH2	1124 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	DIEXF	Q68CQ4	756 aa	Known RBP	10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	SDR42E1	Q8WUS8	393 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	SOCS4	Q8WXH5	440 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	MS4A3	Q96HJ5	214 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	NBPF3	Q9H094	633 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	C11orf49	Q9H6J7	331 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	CABP5	Q9NP86	173 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	COG6	Q9Y2V7	657 aa		10.63	□□□□□ -0.71
TARDBP-222	ENST00000620505	ZNF532	Q9HCE3	1301 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	SOX1	O00570	391 aa	Predicted RBP	10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	IGSF3	O75054	1194 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	VCAM1	P19320	739 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	GUCY1A2	P33402	732 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	RGS2	P41220	211 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	SEPT2	Q15019	361 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	MORN1	Q5T089	497 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	MAP3K21	Q5TCX8	1036 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	CATSPERG	Q6ZRH7	1159 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	LCORL	Q8N3X6	602 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	ANKLE1	Q8NAG6	615 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	SLC44A5	Q8NCS7	719 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP6NL	Q92738	828 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	LRCH3	Q96II8	777 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	EHD4	Q9H223	541 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	ARMT1	Q9H993	441 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	MCM9	Q9NXL9	1143 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	BTBD7	Q9P203	1132 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	ALPK3	Q96L96	1907 aa		10.62	□□□□□ -0.71
TARDBP-222	ENST00000620505	DDX60L	Q5H9U9	1706 aa	Known RBP	10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	PRKAB2	O43741	272 aa		10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	IFIT2	P09913	472 aa	Known RBP	10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	XRCC5	P13010	732 aa	Known RBP	10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	CAPN2	P17655	700 aa		10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	USP14	P54578	494 aa		10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	MAP2K5	Q13163	448 aa		10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	TTF1	Q15361	905 aa	Predicted RBP	10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	HSP90AB4P	Q58FF6	505 aa		10.61	□□□□□ -0.71
TARDBP-222	ENST00000620505	CERS3	Q8IU89	383 aa		10.61	□□□□□ -0.71

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