RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 IKBKBO14920 756 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 ATP2C2O75185 946 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 FGAP02671 866 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 SLC39A14Q15043 492 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 FBXW10Q5XX13 1052 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 POLR3EQ9NVU0 708 aa15.52■□□□□ 0.08
CNTNAP3B-215ENST00000619138 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ITGA6P23229 1130 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NOP2P46087 812 aaKnown RBP15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 POSTNQ15063 836 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 USP49Q70CQ1 688 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BRAPQ7Z569 592 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NCOA7Q8NI08 942 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PPM1EQ8WY54 764 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GREM2Q9H772 168 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ANKZF1Q9H8Y5 726 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 MAN1B1Q9UKM7 699 aa15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.07
CNTNAP3B-215ENST00000619138 EIF5P55010 431 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BEND6Q5SZJ8 279 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SLC9C2Q5TAH2 1124 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ATL3Q6DD88 541 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KRT27Q7Z3Y8 459 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PLCD4Q9BRC7 762 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 JADE2Q9NQC1 790 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ANKRD18BA2A2Z9 1011 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 LRRIQ3A6PVS8 624 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PCCAP05165 728 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 MAGEA9P43362 315 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RNF187Q5TA31 235 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SUSD4Q5VX71 490 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NAPGQ99747 312 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 UTYO14607 1347 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ATP8B1O43520 1251 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ERCC3P19447 782 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RFC4P35249 363 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TSR1Q2NL82 804 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 USPL1Q5W0Q7 1092 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 LRRC31Q6UY01 552 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RSRC2Q7L4I2 434 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KIAA1328Q86T90 577 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ZNF274Q96GC6 653 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RUFY1Q96T51 708 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 HAUS7Q99871 368 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BLZF1Q9H2G9 400 aa15.51■□□□□ 0.07
CNTNAP3B-215ENST00000619138 HSD3B7Q9H2F3 369 aa15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 COPRSQ9NQ92 184 aa15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 EYA2O00167 538 aa15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ATP1A2P50993 1020 aa15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NAP1L1P55209 391 aaKnown RBP15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
CNTNAP3B-215ENST00000619138 MACROD2A1Z1Q3 448 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ERLIN2O94905 339 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BMP6P22004 513 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NR5A1Q13285 461 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TSGA10IPQ3SY00 556 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TMEM67Q5HYA8 995 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 FAM196AQ6ZSG2 479 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KRI1Q8N9T8 703 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ADGRG1Q9Y653 693 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 IFIT3O14879 490 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ADORA1P30542 326 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KCTD16Q68DU8 428 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 CABP5Q9NP86 173 aa15.49■□□□□ 0.07
CNTNAP3B-215ENST00000619138 EBAG9O00559 213 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PDE6BP35913 854 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 CASP7P55210 303 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ATP2B2Q01814 1243 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BCAS4Q8TDM0 211 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 CTNND2Q9UQB3 1225 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 IL15P40933 162 aaPredicted RBP15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 DACH1Q9UI36 760 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ZBTB43O43298 467 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KRT9P35527 623 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 STIM1Q13586 685 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PLIN2Q99541 437 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 UBN2Q6ZU65 1347 aa15.48■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 DIS3L2Q8IYB7 885 aaKnown RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SETDB2Q96T68 719 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 MYCBPQ99417 103 aaPredicted RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ADAMTS7Q9UKP4 1686 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PDE8AO60658 829 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms