RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TMEM179Q6ZVK1 233 aa9.87□□□□□ -0.83
NEK3-209ENST00000618856 ZNF589Q86UQ0 364 aaPredicted RBP9.87□□□□□ -0.83
NEK3-209ENST00000618856 AMOTL1Q8IY63 956 aa9.87□□□□□ -0.83
NEK3-209ENST00000618856 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
NEK3-209ENST00000618856 NACAP1Q9BZK3 213 aa9.87□□□□□ -0.83
NEK3-209ENST00000618856 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
NEK3-209ENST00000618856 CCDC171Q6TFL3 1326 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 A0A1W2PRG0 241 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 BCRP11274 1271 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 RASA1P20936 1047 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 HMGCS2P54868 508 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 MTMR2Q13614 643 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 SEPT2Q15019 361 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 ACER1Q8TDN7 264 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 PARK7Q99497 189 aaKnown RBP9.86□□□□□ -0.83
NEK3-209ENST00000618856 CABP5Q9NP86 173 aa9.86□□□□□ -0.83
NEK3-209ENST00000618856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
NEK3-209ENST00000618856 FGAP02671 866 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 CYP2C8P10632 490 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 NOVP48745 357 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 TDO2P48775 406 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 SP3Q02447 781 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 PPARAQ07869 468 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 DGKZQ13574 1117 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 USP17L2Q6R6M4 530 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 CTU1Q7Z7A3 348 aaKnown RBP9.85□□□□□ -0.83
NEK3-209ENST00000618856 NAPBQ9H115 298 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 IL25Q9H293 177 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 TACC3Q9Y6A5 838 aa9.85□□□□□ -0.83
NEK3-209ENST00000618856 MYH8P13535 1937 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 MINDY4BA8MYZ0 360 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 APPP05067 770 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 CHMLP26374 656 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 USP14P54578 494 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 MFAP1P55081 439 aaKnown RBP9.84□□□□□ -0.83
NEK3-209ENST00000618856 PABPC4Q13310 644 aaKnown RBP eCLIP9.84□□□□□ -0.83
NEK3-209ENST00000618856 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
NEK3-209ENST00000618856 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
NEK3-209ENST00000618856 LBX2Q6XYB7 198 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 GADL1Q6ZQY3 521 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 MKL1Q969V6 931 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 ERO1AQ96HE7 468 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 MCOLN1Q9GZU1 580 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 NBPF3Q9H094 633 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 KANSL2Q9H9L4 492 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 ZNF287Q9HBT7 754 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 PNMA3Q9UL41 463 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 SYNPO2Q9UMS6 1093 aa9.84□□□□□ -0.83
NEK3-209ENST00000618856 RAD50Q92878 1312 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 CENPFP49454 3210 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 ORC4O43929 436 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 GNRH1P01148 92 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
NEK3-209ENST00000618856 CTGFP29279 349 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 GCLCP48506 637 aaPredicted RBP9.83□□□□□ -0.84
NEK3-209ENST00000618856 NT5C2P49902 561 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 LACTBP83111 547 aaPredicted RBP9.83□□□□□ -0.84
NEK3-209ENST00000618856 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 KIAA1755Q5JYT7 1200 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 CATSPERGQ6ZRH7 1159 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 OTOP1Q7RTM1 612 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 DSCC1Q9BVC3 393 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 ASCC2Q9H1I8 757 aaPredicted RBP9.83□□□□□ -0.84
NEK3-209ENST00000618856 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 FOXD4L1Q9NU39 408 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 TMOD4Q9NZQ9 345 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 NYAP2Q9P242 653 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 MORF4L1Q9UBU8 362 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 RLFQ13129 1914 aa9.83□□□□□ -0.84
NEK3-209ENST00000618856 LAMA4Q16363 1823 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 MPHOSPH10O00566 681 aaKnown RBP9.82□□□□□ -0.84
NEK3-209ENST00000618856 ABCB7O75027 752 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 SLC3A2P08195 630 aaKnown RBP9.82□□□□□ -0.84
NEK3-209ENST00000618856 PCP11498 1178 aaKnown RBP9.82□□□□□ -0.84
NEK3-209ENST00000618856 EEF2P13639 858 aaKnown RBP9.82□□□□□ -0.84
NEK3-209ENST00000618856 VCAM1P19320 739 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 ICA1Q05084 483 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 PDE4BQ07343 736 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 FAM110CQ1W6H9 321 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 CD99L2Q8TCZ2 262 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 LPAR1Q92633 364 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 CCDC136Q96JN2 1154 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 P2RX7Q99572 595 aaKnown RBP9.82□□□□□ -0.84
NEK3-209ENST00000618856 VCPKMTQ9H867 229 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 MKNK2Q9HBH9 465 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 CPA4Q9UI42 421 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 A0A0G2JMZ2 1700 aa9.82□□□□□ -0.84
NEK3-209ENST00000618856 USP17L15C9J2P7 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L13C9JLJ4 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L11C9JVI0 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L18D6R9N7 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L22D6RA61 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L17D6RBQ6 530 aa9.81□□□□□ -0.84
NEK3-209ENST00000618856 USP17L19D6RCP7 530 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms