RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 TEKT1Q969V4 418 aa29.27■■■□□ 2.28
VEGFC-202ENST00000618562 GOLPH3LQ9H4A5 285 aa29.27■■■□□ 2.28
VEGFC-202ENST00000618562 IL17RBQ9NRM6 502 aa29.27■■■□□ 2.28
VEGFC-202ENST00000618562 SNW1Q13573 536 aaKnown RBP29.27■■■□□ 2.28
VEGFC-202ENST00000618562 CRACR2BQ8N4Y2 399 aaPredicted RBP29.27■■■□□ 2.28
VEGFC-202ENST00000618562 MYH6P13533 1939 aa29.26■■■□□ 2.27
VEGFC-202ENST00000618562 KINO60870 393 aaKnown RBP29.26■■■□□ 2.27
VEGFC-202ENST00000618562 WDHD1O75717 1129 aaPredicted RBP29.26■■■□□ 2.27
VEGFC-202ENST00000618562 DDAH1O94760 285 aa29.26■■■□□ 2.27
VEGFC-202ENST00000618562 RASA1P20936 1047 aa29.26■■■□□ 2.27
VEGFC-202ENST00000618562 ME1P48163 572 aa29.26■■■□□ 2.27
VEGFC-202ENST00000618562 C16orf86Q6ZW13 317 aa29.26■■■□□ 2.27
VEGFC-202ENST00000618562 USP17L3A6NCW0 530 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 USP17L4A6NCW7 530 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 ZBTB7AO95365 584 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 GUCY1A2P33402 732 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 NOLC1Q14978 699 aaKnown RBP eCLIP29.25■■■□□ 2.27
VEGFC-202ENST00000618562 KRT40Q6A162 431 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 APOBEC3HQ6NTF7 200 aaKnown RBP29.25■■■□□ 2.27
VEGFC-202ENST00000618562 USP17L1Q7RTZ2 530 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 CCDC82Q8N4S0 544 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 DNAJC25Q9H1X3 360 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 SPTLC3Q9NUV7 552 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 A0A1W2PQ27 194 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 A0A1W2PQ64 194 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 A0A1W2PQD8 194 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 KIF28PB7ZC32 967 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 CALM1P0DP23 149 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 CALM2P0DP24 149 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 CALM3P0DP25 149 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 KIF23Q02241 960 aaPredicted RBP29.25■■■□□ 2.27
VEGFC-202ENST00000618562 KIAA0825Q8IV33 1275 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 TRIM22Q8IYM9 498 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 DDX4Q9NQI0 724 aaKnown RBP29.25■■■□□ 2.27
VEGFC-202ENST00000618562 USP40Q9NVE5 1235 aa29.25■■■□□ 2.27
VEGFC-202ENST00000618562 PPIP5K2O43314 1243 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 YEATS4O95619 227 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 CRKP46108 304 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 CDK8P49336 464 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 PICALMQ13492 652 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 CCDC93Q567U6 631 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.24■■■□□ 2.27
VEGFC-202ENST00000618562 POLR3EQ9NVU0 708 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 STX1AQ16623 288 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 ADALQ6DHV7 355 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 CDC42EP5Q6NZY7 148 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 ZNF444Q8N0Y2 327 aaPredicted RBP29.24■■■□□ 2.27
VEGFC-202ENST00000618562 FSIP1Q8NA03 581 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 KCNG4Q8TDN1 519 aa29.24■■■□□ 2.27
VEGFC-202ENST00000618562 GRIPAP1Q4V328 841 aa29.23■■■□□ 2.27
VEGFC-202ENST00000618562 ZNF287Q9HBT7 754 aa29.23■■■□□ 2.27
VEGFC-202ENST00000618562 TSPY3P0CV98 308 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 TSPY8P0CW00 308 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 FUT2Q10981 343 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 PLA2G4DQ86XP0 818 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 DGKHQ86XP1 1220 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 LINC00301Q8NCQ3 95 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 MRPS27Q92552 414 aaKnown RBP29.22■■■□□ 2.27
VEGFC-202ENST00000618562 WASF1Q92558 559 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 ZDHHC15Q96MV8 337 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 TCP11L1Q9NUJ3 509 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 PSME4Q14997 1843 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 YDJCA8MPS7 323 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 RTKN2Q8IZC4 609 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 ANKS1AQ92625 1134 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 MRIQ9BWK5 157 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 RBM28Q9NW13 759 aaKnown RBP29.22■■■□□ 2.27
VEGFC-202ENST00000618562 TAOK2Q9UL54 1235 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 PCDHA7Q9UN72 937 aa29.22■■■□□ 2.27
VEGFC-202ENST00000618562 PLEKHA8P1O95397 391 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 DEXIO95424 95 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 MYSM1Q5VVJ2 828 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 SPC24Q8NBT2 197 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 PSMD1Q99460 953 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 RNF26Q9BY78 433 aaPredicted RBP29.21■■■□□ 2.27
VEGFC-202ENST00000618562 KCNF1Q9H3M0 494 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 PCDHAC2Q9Y5I4 1007 aa29.21■■■□□ 2.27
VEGFC-202ENST00000618562 ZNF75DP51815 510 aa29.2■■■□□ 2.26
VEGFC-202ENST00000618562 ATF5Q9Y2D1 282 aaPredicted RBP29.2■■■□□ 2.26
VEGFC-202ENST00000618562 HDLBPQ00341 1268 aaKnown RBP29.19■■■□□ 2.26
VEGFC-202ENST00000618562 TRIM29Q14134 588 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 STK38Q15208 465 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 FMR1NBQ8N0W7 255 aaPredicted RBP29.19■■■□□ 2.26
VEGFC-202ENST00000618562 KIAA1524Q8TCG1 905 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 RRP9O43818 475 aaKnown RBP29.19■■■□□ 2.26
VEGFC-202ENST00000618562 IQCB1Q15051 598 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 TMTC3Q6ZXV5 915 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 TRIM5Q9C035 493 aa29.19■■■□□ 2.26
VEGFC-202ENST00000618562 CCDC178Q5BJE1 867 aa29.18■■■□□ 2.26
VEGFC-202ENST00000618562 KAT14Q9H8E8 782 aa29.18■■■□□ 2.26
VEGFC-202ENST00000618562 GABPAQ06546 454 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 SARM1Q6SZW1 724 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 CTCFLQ8NI51 663 aaPredicted RBP29.17■■■□□ 2.26
VEGFC-202ENST00000618562 ANO10Q9NW15 660 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 CLIC4Q9Y696 253 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 COL4A5P29400 1685 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 UQCRHLA0A096LP55 91 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 UQCRHP07919 91 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 CDC25BP30305 580 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 NFIAQ12857 509 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms