RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 RILPL1Q5EBL4 403 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 GRAMD1CQ8IYS0 662 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 PDILTQ8N807 584 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 CNNM3Q8NE01 707 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 NAT10Q9H0A0 1025 aaKnown RBP16■□□□□ 0.15
CBWD1-226ENST00000618061 GGA1Q9UJY5 639 aa16■□□□□ 0.15
CBWD1-226ENST00000618061 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 PCP11498 1178 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 SARM1Q6SZW1 724 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 RASGRP2Q7LDG7 609 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 KRT27Q7Z3Y8 459 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 POLR2DO15514 142 aaKnown RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 DDAH1O94760 285 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 KRT2P35908 639 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 KRBA2Q6ZNG9 492 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 FILIP1Q7Z7B0 1213 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
CBWD1-226ENST00000618061 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
CBWD1-226ENST00000618061 CALM1P0DP23 149 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 CALM2P0DP24 149 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 CALM3P0DP25 149 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 BTDP43251 543 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 NPY5RQ15761 445 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.98■□□□□ 0.15
CBWD1-226ENST00000618061 TIGD1Q96MW7 591 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
CBWD1-226ENST00000618061 FAM237AA0A1B0GTK4 181 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 XBP1P17861 261 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 PTPREP23469 700 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 RBM6P78332 1123 aaKnown RBP15.97■□□□□ 0.15
CBWD1-226ENST00000618061 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 TBC1D16Q8TBP0 767 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 SERTAD1Q9UHV2 236 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 NAV1Q8NEY1 1877 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 BAG3O95817 575 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 TPM3P06753 285 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
CBWD1-226ENST00000618061 NCAPHQ15003 741 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 ZNF174Q15697 407 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 KAT14Q9H8E8 782 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 TUBE1Q9UJT0 475 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 PCDHA5Q9Y5H7 936 aa15.97■□□□□ 0.15
CBWD1-226ENST00000618061 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 MFSD14BQ5SR56 506 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
CBWD1-226ENST00000618061 MRFAP1L1Q96HT8 127 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 EPSTI1Q96J88 318 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 NOL10Q9BSC4 688 aaKnown RBP15.96■□□□□ 0.15
CBWD1-226ENST00000618061 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
CBWD1-226ENST00000618061 UQCRHLA0A096LP55 91 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 F8W031 263 aaPredicted RBP15.96■□□□□ 0.14
CBWD1-226ENST00000618061 UQCRHP07919 91 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 TSPY3P0CV98 308 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 TSPY8P0CW00 308 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 ATP1A3P13637 1013 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 BMP6P22004 513 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 GSTO1P78417 241 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 PTPN21Q16825 1174 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 SLC27A3Q5K4L6 730 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 PNMA1Q8ND90 353 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 CPVLQ9H3G5 476 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 IFNKQ9P0W0 207 aa15.96■□□□□ 0.14
CBWD1-226ENST00000618061 A0A087X0B3 334 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 TRIM75PA6NK02 468 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 SMC2O95347 1197 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 CDC25BP30305 580 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 ZNF827Q17R98 1081 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 HSP90AA4PQ58FG1 418 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 MXD3Q9BW11 206 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
CBWD1-226ENST00000618061 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 STX8Q9UNK0 236 aa15.95■□□□□ 0.14
CBWD1-226ENST00000618061 SRPRBQ9Y5M8 271 aaKnown RBP15.95■□□□□ 0.14
CBWD1-226ENST00000618061 GOLGA8HP0CJ92 632 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 SCG2P13521 617 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 IL1R1P14778 569 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 NLRP5P59047 1200 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 GTF2IP78347 998 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 MDM2Q00987 491 aaPredicted RBP15.94■□□□□ 0.14
CBWD1-226ENST00000618061 PIK3AP1Q6ZUJ8 805 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
CBWD1-226ENST00000618061 TNFRSF25Q93038 417 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 CASP1P29466 404 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 PPP4CP60510 307 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 C15orf52Q6ZUT6 534 aaKnown RBP15.94■□□□□ 0.14
CBWD1-226ENST00000618061 RASGRP4Q8TDF6 673 aa15.94■□□□□ 0.14
CBWD1-226ENST00000618061 BPIFA3Q9BQP9 254 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms