RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PLSCR1O15162 318 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 POLA2Q14181 598 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 ATP6V0A2Q9Y487 856 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 TTC41PQ6P2S7 1318 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 PREX2Q70Z35 1606 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 SNX16P57768 344 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 FAM49AQ9H0Q0 323 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-209ENST00000617998 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
POLR2A-209ENST00000617998 ACTN2P35609 894 aa12.33□□□□□ -0.43
POLR2A-209ENST00000617998 PANK2Q9BZ23 570 aa12.33□□□□□ -0.43
POLR2A-209ENST00000617998 CCDC171Q6TFL3 1326 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
POLR2A-209ENST00000617998 PDE4AP27815 886 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
POLR2A-209ENST00000617998 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 CCDC172P0C7W6 258 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
POLR2A-209ENST00000617998 MCTP2Q6DN12 878 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 CHL1O00533 1208 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
POLR2A-209ENST00000617998 HLFQ16534 295 aa12.33□□□□□ -0.44
POLR2A-209ENST00000617998 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 RUFY1Q96T51 708 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 MCM7P33993 719 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 RGS2P41220 211 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 UPP2O95045 317 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 RAG1P15918 1043 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 TTLL1O95922 423 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ASIC1P78348 528 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 HAUS2Q9NVX0 235 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 VAMP4O75379 141 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 GH2P01242 217 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 P4HA1P13674 534 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 TTLL4Q14679 1199 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 MFSD1Q9H3U5 465 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 AGLP35573 1532 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ASB14A6NK59 587 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 TNMDQ9H2S6 317 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
POLR2A-209ENST00000617998 MBD5Q9P267 1494 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 TAF4BQ92750 862 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 GAS2L1Q99501 681 aaPredicted RBP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 TNNT1P13805 278 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 HMGCS2P54868 508 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 PPARAQ07869 468 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 SDR42E1Q8WUS8 393 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 PSTPIP2Q9H939 334 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 SYNMO15061 1565 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 CCNT1O60563 726 aaKnown RBP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
POLR2A-209ENST00000617998 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
POLR2A-209ENST00000617998 RXRAP19793 462 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 PSMD2Q13200 908 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 GLI2P10070 1586 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 INF2Q27J81 1249 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 INPP5FQ9Y2H2 1132 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
POLR2A-209ENST00000617998 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 NKX2-3Q8TAU0 364 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 NSMCE1Q8WV22 266 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
POLR2A-209ENST00000617998 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
POLR2A-209ENST00000617998 TDRD12Q587J7 1177 aaKnown RBP12.3□□□□□ -0.44
POLR2A-209ENST00000617998 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
POLR2A-209ENST00000617998 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
POLR2A-209ENST00000617998 XPAP23025 273 aaPredicted RBP12.29□□□□□ -0.44
POLR2A-209ENST00000617998 AGBL3Q8NEM8 1001 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 DEFB129Q9H1M3 183 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 STX10O60499 249 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 TMEM179Q6ZVK1 233 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
POLR2A-209ENST00000617998 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 KDRP35968 1356 aa12.29□□□□□ -0.44
POLR2A-209ENST00000617998 KIF1BO60333 1816 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms