RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 NUP133Q8WUM0 1156 aa19.04■□□□□ 0.64
SNAP47-213ENST00000617596 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
SNAP47-213ENST00000617596 HERC5Q9UII4 1024 aaKnown RBP19.04■□□□□ 0.64
SNAP47-213ENST00000617596 MTMR7Q9Y216 660 aa19.04■□□□□ 0.64
SNAP47-213ENST00000617596 ADM5C9JUS6 153 aa19.03■□□□□ 0.64
SNAP47-213ENST00000617596 PFKFB2O60825 505 aa19.03■□□□□ 0.64
SNAP47-213ENST00000617596 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.03■□□□□ 0.64
SNAP47-213ENST00000617596 POTEIP0CG38 1075 aa19.02■□□□□ 0.64
SNAP47-213ENST00000617596 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
SNAP47-213ENST00000617596 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.64
SNAP47-213ENST00000617596 ZNF654Q8IZM8 581 aa19.02■□□□□ 0.64
SNAP47-213ENST00000617596 DCPSQ96C86 337 aaKnown RBP19.02■□□□□ 0.64
SNAP47-213ENST00000617596 MTA3Q9BTC8 594 aa19.02■□□□□ 0.64
SNAP47-213ENST00000617596 TCP11L1Q9NUJ3 509 aa19.02■□□□□ 0.64
SNAP47-213ENST00000617596 GOLGA6L3A6NEY3 463 aa19.02■□□□□ 0.63
SNAP47-213ENST00000617596 ZBTB43O43298 467 aa19.02■□□□□ 0.63
SNAP47-213ENST00000617596 RASGRP2Q7LDG7 609 aa19.02■□□□□ 0.63
SNAP47-213ENST00000617596 RRAGCQ9HB90 399 aa19.02■□□□□ 0.63
SNAP47-213ENST00000617596 IQCA1LA6NCM1 817 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 JAK2O60674 1132 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 GH2P01242 217 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 CDC27P30260 824 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 ADD1P35611 737 aaKnown RBP19.01■□□□□ 0.63
SNAP47-213ENST00000617596 METAP2P50579 478 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNAP47-213ENST00000617596 ATP2B2Q01814 1243 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 HSP90AA2PQ14568 343 aaPredicted RBP19.01■□□□□ 0.63
SNAP47-213ENST00000617596 ABCB5Q2M3G0 1257 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 TMTC2Q8N394 836 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
SNAP47-213ENST00000617596 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 CTDNEP1O95476 244 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 GUCY1A2P33402 732 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 SEPT2Q15019 361 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 RAB3GAP1Q15042 981 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 DGKHQ86XP1 1220 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 CCDC17Q96LX7 622 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 KAT14Q9H8E8 782 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 TBC1D12O60347 775 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 PRKG1Q13976 671 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 SYNE3Q6ZMZ3 975 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 KRT26Q7Z3Y9 468 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 SULF1Q8IWU6 871 aa19■□□□□ 0.63
SNAP47-213ENST00000617596 CMTR1Q8N1G2 835 aaKnown RBP19■□□□□ 0.63
SNAP47-213ENST00000617596 INTS4Q96HW7 963 aaKnown RBP19■□□□□ 0.63
SNAP47-213ENST00000617596 PLIN4Q96Q06 1357 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 TROAPQ12815 778 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 CATIPQ7Z7H3 387 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 LRRC47Q8N1G4 583 aaKnown RBP18.99■□□□□ 0.63
SNAP47-213ENST00000617596 PNMA1Q8ND90 353 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 FAM217BQ9NTX9 383 aaPredicted RBP18.99■□□□□ 0.63
SNAP47-213ENST00000617596 CLIP2Q9UDT6 1046 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 PITPNM2Q9BZ72 1349 aa18.99■□□□□ 0.63
SNAP47-213ENST00000617596 POLR2AP24928 1970 aaKnown RBP18.98■□□□□ 0.63
SNAP47-213ENST00000617596 PHF20L1A8MW92 1017 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 NT5C2P49902 561 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 MAP3K10Q02779 954 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
SNAP47-213ENST00000617596 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 SMC3Q9UQE7 1217 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 MYH8P13535 1937 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 XRCC6P12956 609 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNAP47-213ENST00000617596 GJB2P29033 226 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 MRE11P49959 708 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 ANKS1AQ92625 1134 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 GLIS2Q9BZE0 524 aaPredicted RBP18.98■□□□□ 0.63
SNAP47-213ENST00000617596 NMRK2Q9NPI5 230 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
SNAP47-213ENST00000617596 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.98■□□□□ 0.63
SNAP47-213ENST00000617596 EEF2P13639 858 aaKnown RBP18.97■□□□□ 0.63
SNAP47-213ENST00000617596 DDIT3P35638 169 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 CCDC178Q5BJE1 867 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 TMEM179Q6ZVK1 233 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 SIAH1Q8IUQ4 282 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 FANCBQ8NB91 859 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 NSUN7Q8NE18 718 aaKnown RBP18.97■□□□□ 0.63
SNAP47-213ENST00000617596 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 WDR90Q96KV7 1748 aa18.97■□□□□ 0.63
SNAP47-213ENST00000617596 SSC5DA1L4H1 1573 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 TTLL1O95922 423 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 INPP5BP32019 993 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 CAP2P40123 477 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 NOVP48745 357 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 PKP1Q13835 747 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 RTN1Q16799 776 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 ZBTB21Q9ULJ3 1066 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 PTPDC1A2A3K4 754 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 CPLX1O14810 134 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 TOP1P11387 765 aaKnown RBP18.96■□□□□ 0.63
SNAP47-213ENST00000617596 ICA1Q05084 483 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 PNMA8AQ86V59 439 aaPredicted RBP18.96■□□□□ 0.63
SNAP47-213ENST00000617596 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
SNAP47-213ENST00000617596 PHKBQ93100 1093 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 TAOK2Q9UL54 1235 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 PPP2R3BQ9Y5P8 575 aa18.96■□□□□ 0.63
SNAP47-213ENST00000617596 SCN4AP35499 1836 aa18.95■□□□□ 0.62
SNAP47-213ENST00000617596 UBE2Q2LH0YL09 131 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms