RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 LONRF2Q1L5Z9 754 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 HERC4Q5GLZ8 1057 aaPredicted RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 TTC19Q6DKK2 380 aaPredicted RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 RASAL2Q9UJF2 1139 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 CDC25AP30304 524 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 TFAP4Q01664 338 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 ZNF622Q969S3 477 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 BICD1Q96G01 975 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 FAM13AO94988 1023 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 PLCB3Q01970 1234 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 PPARAQ07869 468 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 PTGDRQ13258 359 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 SNX29Q8TEQ0 813 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 ZBTB21Q9ULJ3 1066 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 CDC25BP30305 580 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 BCAMP50895 628 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 PLVAPQ9BX97 442 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 SPATA1Q5VX52 437 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 SYMPKQ92797 1274 aaKnown RBP17.23■□□□□ 0.35
PTPRT-210ENST00000617474 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
PTPRT-210ENST00000617474 CCDC65Q8IXS2 484 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 TTC14Q96N46 770 aa17.23■□□□□ 0.35
PTPRT-210ENST00000617474 NSRP1Q9H0G5 558 aaKnown RBP17.23■□□□□ 0.35
PTPRT-210ENST00000617474 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 EPN1Q9Y6I3 576 aaPredicted RBP17.22■□□□□ 0.35
PTPRT-210ENST00000617474 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
PTPRT-210ENST00000617474 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 CABP7Q86V35 215 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 IFT20Q8IY31 132 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 PKD2L1Q9P0L9 805 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 LIG3P49916 1009 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
PTPRT-210ENST00000617474 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 SOWAHDA6NJG2 315 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 GYG1P46976 350 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 CCDC6Q16204 474 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
PTPRT-210ENST00000617474 NUP58Q9BVL2 599 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
PTPRT-210ENST00000617474 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 BUB1O43683 1085 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 INF2Q27J81 1249 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 B4GALNT4Q76KP1 1039 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 GSTA5Q7RTV2 222 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 CCDC50Q8IVM0 306 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 ACRBPQ8NEB7 543 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 BCAS4Q8TDM0 211 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 PARD6BQ9BYG5 372 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 GREM2Q9H772 168 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 PPANQ9NQ55 473 aaKnown RBP17.21■□□□□ 0.35
PTPRT-210ENST00000617474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRT-210ENST00000617474 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 GNGT1P63211 74 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRT-210ENST00000617474 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 SRGAP1Q7Z6B7 1085 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 CABS1Q96KC9 395 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 KLHL30Q0D2K2 578 aa17.21■□□□□ 0.35
PTPRT-210ENST00000617474 RBL2Q08999 1139 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 PPFIA1Q13136 1202 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 PPP1R7Q15435 360 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 SAMD15Q9P1V8 674 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 FAN1Q9Y2M0 1017 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 CETN3O15182 167 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 CHMP2AO43633 222 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 HSPA2P54652 639 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 ABCA8O94911 1581 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 PNMA6AP0CW24 399 aaPredicted RBP17.2■□□□□ 0.34
PTPRT-210ENST00000617474 MAPKAPK5Q8IW41 473 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 MRRFQ96E11 262 aaKnown RBP17.2■□□□□ 0.34
PTPRT-210ENST00000617474 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 NAA25Q14CX7 972 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
PTPRT-210ENST00000617474 MTRF1LQ9UGC7 380 aaKnown RBP17.2■□□□□ 0.34
PTPRT-210ENST00000617474 IKBKGQ9Y6K9 419 aa17.2■□□□□ 0.34
PTPRT-210ENST00000617474 CALCOCO2Q13137 446 aa17.19■□□□□ 0.34
PTPRT-210ENST00000617474 CFAP221Q4G0U5 840 aa17.19■□□□□ 0.34
PTPRT-210ENST00000617474 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
PTPRT-210ENST00000617474 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
PTPRT-210ENST00000617474 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
PTPRT-210ENST00000617474 IKBKBO14920 756 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms