RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 USP17L10C9JJH3 530 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 BCAR3O75815 825 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 ASNSP08243 561 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 HOXA7P31268 230 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
GPC6-202ENST00000617456 G3BP1Q13283 466 aaKnown RBP eCLIP10.43□□□□□ -0.74
GPC6-202ENST00000617456 ZYXQ15942 572 aaKnown RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 MORN1Q5T089 497 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 WDR78Q5VTH9 848 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 MIER1Q8N108 512 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 TGFBRAP1Q8WUH2 860 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 USP6NLQ92738 828 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 FRAT1Q92837 279 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 ZNF512BQ96KM6 892 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 APBA2Q99767 749 aa10.43□□□□□ -0.74
GPC6-202ENST00000617456 SENP6Q9GZR1 1112 aaPredicted RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 AATFQ9NY61 560 aaKnown RBP eCLIP10.43□□□□□ -0.74
GPC6-202ENST00000617456 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
GPC6-202ENST00000617456 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
GPC6-202ENST00000617456 C19orf81C9J6K1 198 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 UQCRFS1P1P0C7P4 283 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 CNGA1P29973 690 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 POLA2Q14181 598 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 MFSD14CQ5VZR4 134 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 NAA16Q6N069 864 aaPredicted RBP10.42□□□□□ -0.74
GPC6-202ENST00000617456 DNAJC18Q9H819 358 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 SNRKQ9NRH2 765 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 ZBTB21Q9ULJ3 1066 aa10.42□□□□□ -0.74
GPC6-202ENST00000617456 NOP58Q9Y2X3 529 aaKnown RBP10.42□□□□□ -0.74
GPC6-202ENST00000617456 POTEB2H3BUK9 544 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 BAG3O95817 575 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 MCAMP43121 646 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 FAM109BQ6ICB4 259 aaPredicted RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 FTSJ3Q8IY81 847 aaKnown RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 GTF3C2Q8WUA4 911 aaPredicted RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 EDC3Q96F86 508 aaKnown RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 FEZ1Q99689 392 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 DHX36Q9H2U1 1008 aaKnown RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 CHMP4BQ9H444 224 aaKnown RBP10.41□□□□□ -0.74
GPC6-202ENST00000617456 EMILIN3Q9NT22 766 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 FLRT1Q9NZU1 646 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
GPC6-202ENST00000617456 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.74
GPC6-202ENST00000617456 FLT1P17948 1338 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 TTC28Q96AY4 2481 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 GLRX3O76003 335 aaKnown RBP10.4□□□□□ -0.74
GPC6-202ENST00000617456 GH2P01242 217 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 PLCG2P16885 1265 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 RTP1P59025 263 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 CERS3Q8IU89 383 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 FOXP4Q8IVH2 680 aaPredicted RBP10.4□□□□□ -0.74
GPC6-202ENST00000617456 TMEM57Q8N5G2 664 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
GPC6-202ENST00000617456 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
GPC6-202ENST00000617456 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 PNMA6EA0A0J9YXQ4 647 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CNMDO75829 334 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CYP2C19P33261 490 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CCNA1P78396 465 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CCDC158Q5M9N0 1113 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 TTC39AQ5SRH9 613 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 GJC2Q5T442 439 aaPredicted RBP10.39□□□□□ -0.75
GPC6-202ENST00000617456 ADGRA1Q86SQ6 560 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 CDX2Q99626 313 aaPredicted RBP10.39□□□□□ -0.75
GPC6-202ENST00000617456 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
GPC6-202ENST00000617456 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 RABGAP1Q9Y3P9 1069 aa10.39□□□□□ -0.75
GPC6-202ENST00000617456 SIPA1L1O43166 1804 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 SLC15A5A6NIM6 579 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 PTPREP23469 700 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 PPP4CP60510 307 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 DYNLL1P63167 89 aaKnown RBP10.38□□□□□ -0.75
GPC6-202ENST00000617456 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 RAB3GAP1Q15042 981 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 SHHQ15465 462 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms