RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 DCPSQ96C86 337 aaKnown RBP17.78■□□□□ 0.44
CBWD1-225ENST00000616944 SLC12A7Q9Y666 1083 aa17.78■□□□□ 0.44
CBWD1-225ENST00000616944 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
CBWD1-225ENST00000616944 DDIT3P35638 169 aa17.77■□□□□ 0.44
CBWD1-225ENST00000616944 TROAPQ12815 778 aa17.77■□□□□ 0.44
CBWD1-225ENST00000616944 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.44
CBWD1-225ENST00000616944 SLKQ9H2G2 1235 aaPredicted RBP17.77■□□□□ 0.44
CBWD1-225ENST00000616944 ZBTB43O43298 467 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 GDF11O95390 407 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 ABCB5Q2M3G0 1257 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 TMEM179Q6ZVK1 233 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 SULF1Q8IWU6 871 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 ADM5C9JUS6 153 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 PRAMEF18Q5VWM3 479 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 MICU3Q86XE3 530 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 HOOK2Q96ED9 719 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 NCOA5Q9HCD5 579 aaKnown RBP17.76■□□□□ 0.43
CBWD1-225ENST00000616944 FAM217BQ9NTX9 383 aaPredicted RBP17.76■□□□□ 0.43
CBWD1-225ENST00000616944 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
CBWD1-225ENST00000616944 MPHOSPH10O00566 681 aaKnown RBP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 DDAH1O94760 285 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 HSP90AA1P07900 732 aaKnown RBP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 RXRAP19793 462 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 CAP2P40123 477 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 CCT2P78371 535 aaKnown RBP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 KRT26Q7Z3Y9 468 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 RAB11FIP4Q86YS3 637 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 PNMA1Q8ND90 353 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
CBWD1-225ENST00000616944 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 ZNF112Q9UJU3 913 aa17.75■□□□□ 0.43
CBWD1-225ENST00000616944 BAZ2BQ9UIF8 2168 aaKnown RBP17.74■□□□□ 0.43
CBWD1-225ENST00000616944 CTDNEP1O95476 244 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 TTLL1O95922 423 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 GH2P01242 217 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
CBWD1-225ENST00000616944 CDC27P30260 824 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 SEPT2Q15019 361 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
CBWD1-225ENST00000616944 DCAF15Q66K64 600 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 ZBTB21Q9ULJ3 1066 aa17.74■□□□□ 0.43
CBWD1-225ENST00000616944 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
CBWD1-225ENST00000616944 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
CBWD1-225ENST00000616944 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 DLK2Q6UY11 383 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 MKL1Q969V6 931 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
CBWD1-225ENST00000616944 KAT14Q9H8E8 782 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 RRAGCQ9HB90 399 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 NYAP2Q9P242 653 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 PTPRFP10586 1907 aa17.73■□□□□ 0.43
CBWD1-225ENST00000616944 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 KIF3CO14782 793 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CALM1P0DP23 149 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CALM2P0DP24 149 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CALM3P0DP25 149 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 NTRK3Q16288 839 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 SUPT20HL1Q3ZLR7 823 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 FANCBQ8NB91 859 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
CBWD1-225ENST00000616944 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CTNND1O60716 968 aaKnown RBP17.72■□□□□ 0.43
CBWD1-225ENST00000616944 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
CBWD1-225ENST00000616944 ICA1Q05084 483 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 CABP5Q9NP86 173 aa17.72■□□□□ 0.43
CBWD1-225ENST00000616944 DHX16O60231 1041 aaKnown RBP17.71■□□□□ 0.43
CBWD1-225ENST00000616944 ASNSP08243 561 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 EEF2P13639 858 aaKnown RBP17.71■□□□□ 0.43
CBWD1-225ENST00000616944 RTN1Q16799 776 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 CDC37L1Q7L3B6 337 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 CHMP4CQ96CF2 233 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 CDCA5Q96FF9 252 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 GLIS2Q9BZE0 524 aaPredicted RBP17.71■□□□□ 0.43
CBWD1-225ENST00000616944 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
CBWD1-225ENST00000616944 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
CBWD1-225ENST00000616944 JAK2O60674 1132 aa17.7■□□□□ 0.42
CBWD1-225ENST00000616944 DTNBO60941 627 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms