RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PDCL2Q8N4E4 241 aa15.9■□□□□ 0.14
CACNA1C-231ENST00000616390 STAMQ92783 540 aa15.9■□□□□ 0.14
CACNA1C-231ENST00000616390 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
CACNA1C-231ENST00000616390 CICQ96RK0 1608 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 ZPR1O75312 459 aa15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 CBX1P83916 185 aa15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 MTERF4Q7Z6M4 381 aaKnown RBP15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 WNT7AO00755 349 aa15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 PTPREP23469 700 aa15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
CACNA1C-231ENST00000616390 XBP1P17861 261 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 PKN1Q16512 942 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 OSBPL5Q9H0X9 879 aaPredicted RBP15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 MAN1B1Q9UKM7 699 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 ZNF526Q8TF50 670 aaPredicted RBP15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 IMPACTQ9P2X3 320 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
CACNA1C-231ENST00000616390 BCL9LQ86UU0 1499 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 IKBKBO14920 756 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 VEGFAP15692 232 aaPredicted RBP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 KRT2P35908 639 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 SMARCE1Q969G3 411 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 HOOK1Q9UJC3 728 aaKnown RBP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 COBLO75128 1261 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 FMR1Q06787 632 aaKnown RBP eCLIP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 HOMER1Q86YM7 354 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 FAM177A1Q8N128 213 aaPredicted RBP15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 MCM9Q9NXL9 1143 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 ANKIB1Q9P2G1 1089 aa15.87■□□□□ 0.13
CACNA1C-231ENST00000616390 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 STX17P56962 302 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 MDM2Q00987 491 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 NCBP1Q09161 790 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 EP400Q96L91 3159 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CACNA1SQ13698 1873 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 SYT10Q6XYQ8 523 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CCDC150Q8NCX0 1101 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 NFE2L3Q9Y4A8 694 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 SRPRBQ9Y5M8 271 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CTIFO43310 598 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 TROAPQ12815 778 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 NYAP1Q6ZVC0 841 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 FBXO33Q7Z6M2 555 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 DZIP1Q86YF9 867 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CTCFLQ8NI51 663 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 BRIP1Q9BX63 1249 aa15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 CRNKL1Q9BZJ0 848 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-231ENST00000616390 A0A087X0B3 334 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 NRDCO43847 1150 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 CREBRFQ8IUR6 639 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 PPP1R13BQ96KQ4 1090 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 CCDC94Q9BW85 323 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 SAMSN1Q9NSI8 373 aaKnown RBP15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 ADAMTS3O15072 1205 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 TPTE2Q6XPS3 522 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 KIF18AQ8NI77 898 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 DYNLL2Q96FJ2 89 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 PHF20Q9BVI0 1012 aa15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 ZNF215Q9UL58 517 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-231ENST00000616390 NLRP5P59047 1200 aa15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 SYMPKQ92797 1274 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 CCNL1Q9UK58 526 aaPredicted RBP15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 PRPF3O43395 683 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 CBFA2T2O43439 604 aa15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
CACNA1C-231ENST00000616390 CASZ1Q86V15 1759 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 MCM7P33993 719 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 USP5P45974 858 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 ADKP55263 362 aaKnown RBP15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 DMTNQ08495 405 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 FUT2Q10981 343 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 DIXDC1Q155Q3 683 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 BRMS1Q9HCU9 246 aa15.83■□□□□ 0.13
CACNA1C-231ENST00000616390 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
CACNA1C-231ENST00000616390 ACTN4O43707 911 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms