RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 RCAN1P53805 252 aa27.4■■□□□ 1.98
CCND3-223ENST00000616010 SHROOM1Q2M3G4 852 aaPredicted RBP27.4■■□□□ 1.98
CCND3-223ENST00000616010 CLEC10AQ8IUN9 316 aa27.4■■□□□ 1.98
CCND3-223ENST00000616010 NSUN7Q8NE18 718 aaKnown RBP27.4■■□□□ 1.98
CCND3-223ENST00000616010 CHMP4CQ96CF2 233 aa27.4■■□□□ 1.98
CCND3-223ENST00000616010 LLPHQ9BRT6 129 aaKnown RBP27.4■■□□□ 1.98
CCND3-223ENST00000616010 CIZ1Q9ULV3 898 aaPredicted RBP27.4■■□□□ 1.98
CCND3-223ENST00000616010 SCN4AP35499 1836 aa27.39■■□□□ 1.98
CCND3-223ENST00000616010 IGKV6D-41A0A0C4DH26 115 aa27.39■■□□□ 1.98
CCND3-223ENST00000616010 CPLX1O14810 134 aa27.39■■□□□ 1.98
CCND3-223ENST00000616010 CDC27P30260 824 aa27.39■■□□□ 1.98
CCND3-223ENST00000616010 PTPDC1A2A3K4 754 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 DDAH1O94760 285 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 MTMR4Q9NYA4 1195 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 TBC1D12O60347 775 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 EPHX2P34913 555 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 ADD1P35611 737 aaKnown RBP27.38■■□□□ 1.97
CCND3-223ENST00000616010 TROAPQ12815 778 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 RTN1Q16799 776 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 PNMA1Q8ND90 353 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 TMEM47Q9BQJ4 181 aa27.38■■□□□ 1.97
CCND3-223ENST00000616010 PPFIA3O75145 1194 aa27.37■■□□□ 1.97
CCND3-223ENST00000616010 RRP1BQ14684 758 aaKnown RBP27.37■■□□□ 1.97
CCND3-223ENST00000616010 ABCB5Q2M3G0 1257 aa27.37■■□□□ 1.97
CCND3-223ENST00000616010 WDR90Q96KV7 1748 aa27.37■■□□□ 1.97
CCND3-223ENST00000616010 POLR2AP24928 1970 aaKnown RBP27.37■■□□□ 1.97
CCND3-223ENST00000616010 PITPNM2Q9BZ72 1349 aa27.37■■□□□ 1.97
CCND3-223ENST00000616010 FANCBQ8NB91 859 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 SMARCC2Q8TAQ2 1214 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 DDX11Q96FC9 970 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 FAM217BQ9NTX9 383 aaPredicted RBP27.36■■□□□ 1.97
CCND3-223ENST00000616010 CALM1P0DP23 149 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 CALM2P0DP24 149 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 CALM3P0DP25 149 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 NOVP48745 357 aa27.36■■□□□ 1.97
CCND3-223ENST00000616010 MYH4Q9Y623 1939 aa27.35■■□□□ 1.97
CCND3-223ENST00000616010 PKP1Q13835 747 aa27.35■■□□□ 1.97
CCND3-223ENST00000616010 TMEM179Q6ZVK1 233 aa27.35■■□□□ 1.97
CCND3-223ENST00000616010 TTLL1O95922 423 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 TOP1P11387 765 aaKnown RBP27.34■■□□□ 1.97
CCND3-223ENST00000616010 NBPF12Q5TAG4 269 aaPredicted RBP27.34■■□□□ 1.97
CCND3-223ENST00000616010 USP50Q70EL3 339 aaPredicted RBP27.34■■□□□ 1.97
CCND3-223ENST00000616010 IQCA1LA6NCM1 817 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 GH2P01242 217 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 MAP3K10Q02779 954 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 PRAMEF18Q5VWM3 479 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 PPP2R3BQ9Y5P8 575 aa27.34■■□□□ 1.97
CCND3-223ENST00000616010 CCDC196A0A1B0GTZ2 297 aa27.33■■□□□ 1.97
CCND3-223ENST00000616010 JAG1P78504 1218 aa27.33■■□□□ 1.97
CCND3-223ENST00000616010 HMGN5P82970 282 aaKnown RBP27.33■■□□□ 1.97
CCND3-223ENST00000616010 SEPT2Q15019 361 aa27.33■■□□□ 1.97
CCND3-223ENST00000616010 CPLX2Q6PUV4 134 aaKnown RBP27.33■■□□□ 1.97
CCND3-223ENST00000616010 DCPSQ96C86 337 aaKnown RBP27.33■■□□□ 1.97
CCND3-223ENST00000616010 CABP5Q9NP86 173 aa27.33■■□□□ 1.97
CCND3-223ENST00000616010 MTMR7Q9Y216 660 aa27.33■■□□□ 1.97
CCND3-223ENST00000616010 CDKL5O76039 1030 aa27.33■■□□□ 1.96
CCND3-223ENST00000616010 ATP2B2Q01814 1243 aa27.33■■□□□ 1.96
CCND3-223ENST00000616010 RAB3GAP1Q15042 981 aa27.33■■□□□ 1.96
CCND3-223ENST00000616010 LRRC47Q8N1G4 583 aaKnown RBP27.33■■□□□ 1.96
CCND3-223ENST00000616010 CTCFLQ8NI51 663 aaPredicted RBP27.33■■□□□ 1.96
CCND3-223ENST00000616010 CLIP2Q9UDT6 1046 aa27.33■■□□□ 1.96
CCND3-223ENST00000616010 GUCY1A2P33402 732 aa27.32■■□□□ 1.96
CCND3-223ENST00000616010 NTRK3Q16288 839 aa27.32■■□□□ 1.96
CCND3-223ENST00000616010 TAF1DQ9H5J8 278 aaPredicted RBP27.32■■□□□ 1.96
CCND3-223ENST00000616010 KANSL2Q9H9L4 492 aa27.32■■□□□ 1.96
CCND3-223ENST00000616010 DCAF8L1A6NGE4 600 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 ICA1Q05084 483 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 PPP2R5BQ15173 497 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 PPP4R3BQ5MIZ7 849 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 FAM184AQ8NB25 1140 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 RBM28Q9NW13 759 aaKnown RBP27.31■■□□□ 1.96
CCND3-223ENST00000616010 ATAD5Q96QE3 1844 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 NUCB2P80303 420 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 CMTR1Q8N1G2 835 aaKnown RBP27.31■■□□□ 1.96
CCND3-223ENST00000616010 PHKBQ93100 1093 aa27.31■■□□□ 1.96
CCND3-223ENST00000616010 POTECB2RU33 542 aa27.3■■□□□ 1.96
CCND3-223ENST00000616010 SYT1P21579 422 aa27.3■■□□□ 1.96
CCND3-223ENST00000616010 EAPPQ56P03 285 aaPredicted RBP27.3■■□□□ 1.96
CCND3-223ENST00000616010 RASGRP2Q7LDG7 609 aa27.3■■□□□ 1.96
CCND3-223ENST00000616010 SULF1Q8IWU6 871 aa27.3■■□□□ 1.96
CCND3-223ENST00000616010 ZBTB21Q9ULJ3 1066 aa27.3■■□□□ 1.96
CCND3-223ENST00000616010 SSC5DA1L4H1 1573 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 ADM5C9JUS6 153 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 PLEKHA8P1O95397 391 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 EEF2P13639 858 aaKnown RBP27.29■■□□□ 1.96
CCND3-223ENST00000616010 FDPSP14324 419 aaKnown RBP27.29■■□□□ 1.96
CCND3-223ENST00000616010 CAP2P40123 477 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 DCAF15Q66K64 600 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 HOOK2Q96ED9 719 aa27.29■■□□□ 1.96
CCND3-223ENST00000616010 PHF20L1A8MW92 1017 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 IFNAR1P17181 557 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 KIF5BP33176 963 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 GRM4Q14833 912 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 LARP1BQ659C4 914 aaKnown RBP27.28■■□□□ 1.96
CCND3-223ENST00000616010 CCDC82Q8N4S0 544 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 ORC3Q9UBD5 711 aaPredicted RBP27.28■■□□□ 1.96
CCND3-223ENST00000616010 KIF3AQ9Y496 699 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 STX6O43752 255 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 PDCP20941 246 aa27.28■■□□□ 1.96
CCND3-223ENST00000616010 ZC3H15Q8WU90 426 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms