RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ENOX2Q16206 610 aaKnown RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CCDC24Q8N4L8 307 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 GAS7O60861 476 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 FASTKD5Q7L8L6 764 aaKnown RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 RAB11FIP4Q86YS3 637 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 KIAA1524Q8TCG1 905 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 MIS12Q9H081 205 aa10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CWC15Q9P013 229 aaKnown RBP10.93□□□□□ -0.66
TNFRSF9-204ENST00000615230 CNTNAP4Q9C0A0 1308 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 N4BP3O15049 544 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 GNAT1P11488 350 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 ALAS1P13196 640 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 PDE6AP16499 860 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 RPS12P25398 132 aaKnown RBP10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 NEK11Q8NG66 645 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 LRFN2Q9ULH4 789 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 ITSN1Q15811 1721 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 GOLGA6L7A0A1B0GV03 622 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 STAMBPO95630 424 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 GNA14O95837 355 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 FAM47CQ5HY64 1035 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 TTC38Q5R3I4 469 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 LIN9Q5TKA1 542 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 TRMT1LQ7Z2T5 733 aaKnown RBP10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 DEPTORQ8TB45 409 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 BCAMP50895 628 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 MRPS9P82933 396 aaKnown RBP10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 ECE2O60344 883 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 SP4Q02446 784 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 USH1GQ495M9 461 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
TNFRSF9-204ENST00000615230 LAD1O00515 517 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 CUTAO60888 179 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 CTDSPL2Q05D32 466 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 TRIM14Q14142 442 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 AMNQ9BXJ7 453 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 PSTPIP2Q9H939 334 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 CLUL1Q15846 466 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 N4BP1O75113 896 aaKnown RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 MFSD14CQ5VZR4 134 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 DHX58Q96C10 678 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 TSGA10Q9BZW7 698 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 KCNH4Q9UQ05 1017 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 ATP8B3O60423 1300 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 SREBF2Q12772 1141 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 DBNDD1Q9H9R9 158 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 PRPF6O94906 941 aaKnown RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 ASNSP08243 561 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 KRT83P78385 493 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 SMC1AQ14683 1233 aaKnown RBP10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
TNFRSF9-204ENST00000615230 GSTTP1A0A1W2PQM5 241 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 AFMP43652 599 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 ATP6V0A1Q93050 837 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 LRWD1Q9UFC0 647 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 C21orf2O43822 256 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 AK2P54819 239 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 PIK3AP1Q6ZUJ8 805 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 LRRIQ1Q96JM4 1722 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 NRKQ7Z2Y5 1582 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 KCNQ3O43525 872 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 CHMP2AO43633 222 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 BIRC3Q13489 604 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 ZNF274Q96GC6 653 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 LRRC2Q9BYS8 371 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 NSMCE1Q8WV22 266 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
TNFRSF9-204ENST00000615230 USP17L12C9JPN9 530 aa10.9□□□□□ -0.67
TNFRSF9-204ENST00000615230 USP17L21D6R901 530 aa10.9□□□□□ -0.67
TNFRSF9-204ENST00000615230 SGSM2O43147 1006 aa10.9□□□□□ -0.67
TNFRSF9-204ENST00000615230 FEM1BQ9UK73 627 aa10.9□□□□□ -0.67
TNFRSF9-204ENST00000615230 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.67
TNFRSF9-204ENST00000615230 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SRP68Q9UHB9 627 aaKnown RBP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.89□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZMYM6O95789 1325 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms