RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SLX4Q8IY92 1834 aa22.08■■□□□ 1.12
MMP28-204ENST00000615136 GOLGA6L6A8MZA4 724 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 DDAH1O94760 285 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 ZNF165P49910 485 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 NR5A1Q13285 461 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 AXDND1Q5T1B0 1012 aaPredicted RBP22.07■■□□□ 1.12
MMP28-204ENST00000615136 KCNG4Q8TDN1 519 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 DNAJC25Q9H1X3 360 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
MMP28-204ENST00000615136 V9GY48 417 aaPredicted RBP22.07■■□□□ 1.12
MMP28-204ENST00000615136 BAZ2BQ9UIF8 2168 aaKnown RBP22.07■■□□□ 1.12
MMP28-204ENST00000615136 PTPAQ15257 358 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 TMTC3Q6ZXV5 915 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 SRBD1Q8N5C6 995 aaKnown RBP22.07■■□□□ 1.12
MMP28-204ENST00000615136 VPS54Q9P1Q0 977 aa22.07■■□□□ 1.12
MMP28-204ENST00000615136 A0A1W2PQ27 194 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 A0A1W2PQ64 194 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 A0A1W2PQD8 194 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 TOB1P50616 345 aaPredicted RBP22.06■■□□□ 1.12
MMP28-204ENST00000615136 NDUFA8P51970 172 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 SLC39A14Q15043 492 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 PPP2R5BQ15173 497 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 NOSTRINQ8IVI9 506 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 FMR1NBQ8N0W7 255 aaPredicted RBP22.06■■□□□ 1.12
MMP28-204ENST00000615136 MRPS27Q92552 414 aaKnown RBP22.06■■□□□ 1.12
MMP28-204ENST00000615136 MKNK2Q9HBH9 465 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 SPTLC3Q9NUV7 552 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 KINO60870 393 aaKnown RBP22.06■■□□□ 1.12
MMP28-204ENST00000615136 RASA1P20936 1047 aa22.06■■□□□ 1.12
MMP28-204ENST00000615136 CNTNAP5Q8WYK1 1306 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 MYH1P12882 1939 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 PRPF3O43395 683 aaKnown RBP22.05■■□□□ 1.12
MMP28-204ENST00000615136 NOLC1Q14978 699 aaKnown RBP eCLIP22.05■■□□□ 1.12
MMP28-204ENST00000615136 STX1AQ16623 288 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 PLA2G4DQ86XP0 818 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 ERCC4Q92889 916 aaPredicted RBP22.05■■□□□ 1.12
MMP28-204ENST00000615136 KCNF1Q9H3M0 494 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 DBNDD1Q9H9R9 158 aa22.05■■□□□ 1.12
MMP28-204ENST00000615136 RBM28Q9NW13 759 aaKnown RBP22.05■■□□□ 1.12
MMP28-204ENST00000615136 SNED1Q8TER0 1413 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 CALM1P0DP23 149 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 CALM2P0DP24 149 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 CALM3P0DP25 149 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 VEGFAP15692 232 aaPredicted RBP22.04■■□□□ 1.12
MMP28-204ENST00000615136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.04■■□□□ 1.12
MMP28-204ENST00000615136 FOCADQ5VW36 1801 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 A0A087WWV3 80 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 SCNN1DP51172 638 aa22.04■■□□□ 1.12
MMP28-204ENST00000615136 TTF2Q9UNY4 1162 aaKnown RBP22.04■■□□□ 1.12
MMP28-204ENST00000615136 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
MMP28-204ENST00000615136 FAM205CA6NFA0 338 aa22.03■■□□□ 1.12
MMP28-204ENST00000615136 CDK8P49336 464 aa22.03■■□□□ 1.12
MMP28-204ENST00000615136 IQCB1Q15051 598 aa22.03■■□□□ 1.12
MMP28-204ENST00000615136 AMOTL1Q8IY63 956 aa22.03■■□□□ 1.12
MMP28-204ENST00000615136 H0YIN7 160 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 TSPY3P0CV98 308 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 TSPY8P0CW00 308 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 ZNF75DP51815 510 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 RASGRP2Q7LDG7 609 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 SPC24Q8NBT2 197 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 CTCFLQ8NI51 663 aaPredicted RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 PLCG2P16885 1265 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 AKAP17AQ02040 695 aaKnown RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 PICALMQ13492 652 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 SAFBQ15424 915 aaKnown RBP eCLIP22.02■■□□□ 1.12
MMP28-204ENST00000615136 EARS2Q5JPH6 523 aaKnown RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 C11orf57Q6ZUT1 292 aaPredicted RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 C16orf86Q6ZW13 317 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 DGKHQ86XP1 1220 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 SLF2Q8IX21 1173 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 ZNF444Q8N0Y2 327 aaPredicted RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 STAG2Q8N3U4 1231 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 PNMA1Q8ND90 353 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 KIAA1524Q8TCG1 905 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 CLIC6Q96NY7 704 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 FOXP1Q9H334 677 aaPredicted RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 KAT14Q9H8E8 782 aa22.02■■□□□ 1.12
MMP28-204ENST00000615136 DDX4Q9NQI0 724 aaKnown RBP22.02■■□□□ 1.12
MMP28-204ENST00000615136 CERS3Q8IU89 383 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 ANKS1AQ92625 1134 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 PHF20Q9BVI0 1012 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 STK32BQ9NY57 414 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 SCN9AQ15858 1988 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 NPY5RQ15761 445 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 NOM1Q5C9Z4 860 aaKnown RBP22.01■■□□□ 1.11
MMP28-204ENST00000615136 STYK1Q6J9G0 422 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 SHC4Q6S5L8 630 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 SARM1Q6SZW1 724 aa22.01■■□□□ 1.11
MMP28-204ENST00000615136 ADAMTS3O15072 1205 aa22■■□□□ 1.11
MMP28-204ENST00000615136 PFKFB1P16118 471 aa22■■□□□ 1.11
MMP28-204ENST00000615136 SLC35G1Q2M3R5 365 aa22■■□□□ 1.11
MMP28-204ENST00000615136 MTMR7Q9Y216 660 aa22■■□□□ 1.11
MMP28-204ENST00000615136 PCDHAC2Q9Y5I4 1007 aa22■■□□□ 1.11
MMP28-204ENST00000615136 PPP6R2O75170 966 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 CDC25BP30305 580 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 TRIM5Q9C035 493 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 TMX4Q9H1E5 349 aaPredicted RBP21.99■■□□□ 1.11
MMP28-204ENST00000615136 CABP5Q9NP86 173 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 TCP11L1Q9NUJ3 509 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 ANO10Q9NW15 660 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms