RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PARK7Q99497 189 aaKnown RBP19.98■□□□□ 0.79
CBWD3-211ENST00000615061 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
CBWD3-211ENST00000615061 A0A1W2PRG0 241 aa19.97■□□□□ 0.79
CBWD3-211ENST00000615061 PRDM1O75626 825 aa19.97■□□□□ 0.79
CBWD3-211ENST00000615061 CENPQQ7L2Z9 268 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-211ENST00000615061 FEZ1Q99689 392 aa19.97■□□□□ 0.79
CBWD3-211ENST00000615061 TMOD4Q9NZQ9 345 aa19.97■□□□□ 0.79
CBWD3-211ENST00000615061 CCDC171Q6TFL3 1326 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 C19orf81C9J6K1 198 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 RASA1P20936 1047 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 ARHGAP39Q9C0H5 1083 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 DIAPH3Q9NSV4 1193 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 SLC45A1Q9Y2W3 748 aa19.96■□□□□ 0.79
CBWD3-211ENST00000615061 GREB1LQ9C091 1923 aaPredicted RBP19.96■□□□□ 0.79
CBWD3-211ENST00000615061 PPARAQ07869 468 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 SIAH1Q8IUQ4 282 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 CCDC17Q96LX7 622 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 IL25Q9H293 177 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 TAOK2Q9UL54 1235 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 DOCK3Q8IZD9 2030 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 NEFLP07196 543 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 HSPD1P10809 573 aaKnown RBP19.95■□□□□ 0.78
CBWD3-211ENST00000615061 SMCR8Q8TEV9 937 aaPredicted RBP19.95■□□□□ 0.78
CBWD3-211ENST00000615061 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.95■□□□□ 0.78
CBWD3-211ENST00000615061 ASCC2Q9H1I8 757 aaPredicted RBP19.95■□□□□ 0.78
CBWD3-211ENST00000615061 MKNK2Q9HBH9 465 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
CBWD3-211ENST00000615061 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
CBWD3-211ENST00000615061 BCRP11274 1271 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 ICA1Q05084 483 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 CTDSPL2Q05D32 466 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 ERO1AQ96HE7 468 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 KIAA1683Q9H0B3 1180 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 INCENPQ9NQS7 918 aa19.94■□□□□ 0.78
CBWD3-211ENST00000615061 FGAP02671 866 aa19.93■□□□□ 0.78
CBWD3-211ENST00000615061 CTGFP29279 349 aa19.93■□□□□ 0.78
CBWD3-211ENST00000615061 LACTBP83111 547 aaPredicted RBP19.93■□□□□ 0.78
CBWD3-211ENST00000615061 ABHD8Q96I13 439 aa19.93■□□□□ 0.78
CBWD3-211ENST00000615061 TACC3Q9Y6A5 838 aa19.93■□□□□ 0.78
CBWD3-211ENST00000615061 MGAMO43451 1857 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 HIP1O00291 1037 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 CAPN15O75808 1086 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 VCAM1P19320 739 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 ALX1Q15699 326 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 KIAA1755Q5JYT7 1200 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 C12orf42Q96LP6 360 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 EFCC1Q9HA90 598 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 PNMA3Q9UL41 463 aa19.92■□□□□ 0.78
CBWD3-211ENST00000615061 PEX10O60683 326 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 OSBPP22059 807 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 HOXA7P31268 230 aaPredicted RBP19.91■□□□□ 0.78
CBWD3-211ENST00000615061 USP14P54578 494 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 ATP2B2Q01814 1243 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 PABPC4Q13310 644 aaKnown RBP eCLIP19.91■□□□□ 0.78
CBWD3-211ENST00000615061 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 P2RX7Q99572 595 aaKnown RBP19.91■□□□□ 0.78
CBWD3-211ENST00000615061 MYH4Q9Y623 1939 aa19.91■□□□□ 0.78
CBWD3-211ENST00000615061 EEF2P13639 858 aaKnown RBP19.9■□□□□ 0.78
CBWD3-211ENST00000615061 IRX3P78415 501 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-211ENST00000615061 ZNF444Q8N0Y2 327 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-211ENST00000615061 HAND2P61296 217 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 PDE4BQ07343 736 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 FAM47AQ5JRC9 791 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 KANSL2Q9H9L4 492 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.9■□□□□ 0.78
CBWD3-211ENST00000615061 TMX2Q9Y320 296 aa19.9■□□□□ 0.78
CBWD3-211ENST00000615061 CHMLP26374 656 aa19.89■□□□□ 0.77
CBWD3-211ENST00000615061 POTEEQ6S8J3 1075 aa19.89■□□□□ 0.77
CBWD3-211ENST00000615061 SPICE1Q8N0Z3 855 aa19.89■□□□□ 0.77
CBWD3-211ENST00000615061 ARHGEF10LQ9HCE6 1279 aa19.89■□□□□ 0.77
CBWD3-211ENST00000615061 SLC3A2P08195 630 aaKnown RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 PSMC4P43686 418 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 MFAP1P55081 439 aaKnown RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 HERVK_113P62684 666 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 TRIM47Q96LD4 638 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 RPAP3Q9H6T3 665 aaPredicted RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 ZNF287Q9HBT7 754 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 ANAPC4Q9UJX5 808 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 ZMYM6O95789 1325 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 RLFQ13129 1914 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 KIAA0100Q14667 2235 aaKnown RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 IGKV6D-41A0A0C4DH26 115 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 KIF22Q14807 665 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 PKN2Q16513 984 aaKnown RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 FBXO46Q6PJ61 603 aaPredicted RBP19.88■□□□□ 0.77
CBWD3-211ENST00000615061 CEP95Q96GE4 821 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 NBPF3Q9H094 633 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 TXNRD2Q9NNW7 524 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 HPS5Q9UPZ3 1129 aa19.88■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
CBWD3-211ENST00000615061 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms