RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SNAP23O00161 211 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 BMP15O95972 392 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PHF20Q9BVI0 1012 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TCP11L1Q9NUJ3 509 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 GSDMDP57764 484 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ST5P78524 1137 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 NCAPHQ15003 741 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SRPRBQ9Y5M8 271 aaKnown RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 GYG1P46976 350 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PPP4CP60510 307 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TROAPQ12815 778 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 KRI1Q8N9T8 703 aaKnown RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PHKBQ93100 1093 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CARD6Q9BX69 1037 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 KAT6BQ8WYB5 2073 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CAPN2P17655 700 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 HIBADHP31937 336 aaKnown RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PKN1Q16512 942 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TRIML1Q8N9V2 468 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TNFRSF25Q93038 417 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 RABEP2Q9H5N1 569 aa12.41□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 C10orf71Q711Q0 1435 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SYKP43405 635 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CLCN6P51797 869 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 AIFM3Q96NN9 605 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 CALCOCO1Q9P1Z2 691 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 TNKSO95271 1327 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 PPARDQ03181 441 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 SYCP1Q15431 976 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 UBAC1Q9BSL1 405 aa12.4□□□□□ -0.42
SENP3-EIF4A1-201ENST00000614237 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TUBB4AP04350 444 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 XBP1P17861 261 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SFPQP23246 707 aaKnown RBP eCLIP12.39□□□□□ -0.436e-7■■■■□ 22.5
SENP3-EIF4A1-201ENST00000614237 MECOMQ03112 1051 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MCM6Q14566 821 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SH3GLB2Q9NR46 395 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ZPR1O75312 459 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 HSD3B7Q9H2F3 369 aa12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DCP1AQ9NPI6 582 aaPredicted RBP12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.431e-323■■■■□ 25.1
SENP3-EIF4A1-201ENST00000614237 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GUCY1A2P33402 732 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GRAPQ13588 217 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TAF3Q5VWG9 929 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 CATIPQ7Z7H3 387 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 GRAPLQ8TC17 118 aaPredicted RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 HINFPQ9BQA5 517 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 TPM4P67936 248 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SEMA3FQ13275 785 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 KCNH3Q9ULD8 1083 aa12.38□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SERPINC1P01008 464 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 NOVP48745 357 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
SENP3-EIF4A1-201ENST00000614237 SRRTQ9BXP5 876 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms