RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 MB21D2Q8IYB1 491 aaPredicted RBP9.86□□□□□ -0.83
PSMB3-208ENST00000613870 ZSCAN31Q96LW9 406 aaPredicted RBP9.86□□□□□ -0.83
PSMB3-208ENST00000613870 TTC14Q96N46 770 aa9.86□□□□□ -0.83
PSMB3-208ENST00000613870 ZKSCAN3Q9BRR0 538 aa9.86□□□□□ -0.83
PSMB3-208ENST00000613870 DHX36Q9H2U1 1008 aaKnown RBP9.86□□□□□ -0.83
PSMB3-208ENST00000613870 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
PSMB3-208ENST00000613870 ELP3Q9H9T3 547 aa9.86□□□□□ -0.83
PSMB3-208ENST00000613870 MANSC4A6NHS7 340 aaPredicted RBP9.85□□□□□ -0.83
PSMB3-208ENST00000613870 CCDC69A6NI79 296 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 IGF2BP3O00425 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
PSMB3-208ENST00000613870 MPHOSPH10O00566 681 aaKnown RBP9.85□□□□□ -0.83
PSMB3-208ENST00000613870 ENTPD3O75355 529 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 TSPY3P0CV98 308 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 TSPY8P0CW00 308 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 CDK8P49336 464 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 INHBEP58166 350 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 TFAP4Q01664 338 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 WTAPQ15007 396 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 SLC44A5Q8NCS7 719 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.85□□□□□ -0.832e-7■■■■□ 24.5
PSMB3-208ENST00000613870 FAM151AQ8WW52 585 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 TMX3Q96JJ7 454 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 TMEM87BQ96K49 555 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 CFHR5Q9BXR6 569 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 IDI2Q9BXS1 227 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
PSMB3-208ENST00000613870 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 PI4KBQ9UBF8 816 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 FAM198AQ9UFP1 575 aa9.85□□□□□ -0.83
PSMB3-208ENST00000613870 WDR19Q8NEZ3 1342 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 KLF18A0A0U1RQI7 1052 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 GOLGA8BA8MQT2 603 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 ORC4O43929 436 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 EXOSC10Q01780 885 aaKnown RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 VGLL4Q14135 290 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 C16orf86Q6ZW13 317 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 IFNL1Q8IU54 200 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 CCDC83Q8IWF9 413 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 NECAB1Q8N987 351 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 ZNF296Q8WUU4 475 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 OPTNQ96CV9 577 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 PTPN18Q99952 460 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 ALDH8A1Q9H2A2 487 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 GPHNQ9NQX3 736 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 SWAP70Q9UH65 585 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 SERPINB13Q9UIV8 391 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 TACC3Q9Y6A5 838 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 NAV1Q8NEY1 1877 aa9.84□□□□□ -0.83
PSMB3-208ENST00000613870 BAZ2AQ9UIF9 1905 aaKnown RBP9.84□□□□□ -0.83
PSMB3-208ENST00000613870 CENPFP49454 3210 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 DDTLA6NHG4 134 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 GPR25O00155 361 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 SH2B2O14492 632 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 NPM3O75607 178 aaKnown RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 ALDH1A1P00352 501 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 ANTXR2P58335 489 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 CCT2P78371 535 aaKnown RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 TOB2Q14106 344 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 NOM1Q5C9Z4 860 aaKnown RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 IFIT1BQ5T764 474 aaKnown RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 MIGA2Q7L4E1 593 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 RAB11FIP4Q86YS3 637 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 FOXP4Q8IVH2 680 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 ZKSCAN4Q969J2 545 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 ZSCAN10Q96SZ4 725 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
PSMB3-208ENST00000613870 SLC12A7Q9Y666 1083 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 SNCAIPQ9Y6H5 919 aa9.83□□□□□ -0.84
PSMB3-208ENST00000613870 TNKSO95271 1327 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 LAMA4Q16363 1823 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 CCDC85CA6NKD9 419 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 FAM196BA6NMK8 535 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 RASA1P20936 1047 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 INPP5BP32019 993 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 ATP2B2Q01814 1243 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 ME3Q16798 604 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 SH3BP5LQ7L8J4 393 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 CTU1Q7Z7A3 348 aaKnown RBP9.82□□□□□ -0.84
PSMB3-208ENST00000613870 CATIPQ7Z7H3 387 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 NUP133Q8WUM0 1156 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 CHMP4CQ96CF2 233 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 HOOK2Q96ED9 719 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 WRNIP1Q96S55 665 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 ZNF112Q9UJU3 913 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 SMC3Q9UQE7 1217 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 ROBO3Q96MS0 1386 aa9.82□□□□□ -0.84
PSMB3-208ENST00000613870 HTTP42858 3142 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms