RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 CEP85Q6P2H3 762 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 MICU3Q86XE3 530 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
CLCN3-211ENST00000613795 SUPT20HQ8NEM7 779 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 IRAK4Q9NWZ3 460 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 GCC2Q8IWJ2 1684 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 POLD1P28340 1107 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 POLE2P56282 527 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 TSHZ3Q63HK5 1081 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
CLCN3-211ENST00000613795 SYCE1Q8N0S2 351 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 PLBD2Q8NHP8 589 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 CNOT10Q9H9A5 744 aaKnown RBP7.62□□□□□ -1.19
CLCN3-211ENST00000613795 CTTNBP2NLQ9P2B4 639 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 POLKQ9UBT6 870 aa7.62□□□□□ -1.19
CLCN3-211ENST00000613795 KDM5AP29375 1690 aaKnown RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 RPS6KB1P23443 525 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 ANO1Q5XXA6 986 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 BICD1Q96G01 975 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 RPL13P26373 211 aaKnown RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 NAPAP54920 295 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 P3H4Q92791 437 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 SPDYE3A6NKU9 549 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 STX2P32856 288 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 KRT9P35527 623 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 PLCD1P51178 756 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 RBM26Q5T8P6 1007 aaKnown RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 C16orf71Q8IYS4 520 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 PARD6BQ9BYG5 372 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 PNMA2Q9UL42 364 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 TRIM35Q9UPQ4 493 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 ATP5J2-PTCD1G3V325 749 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 LMNAP02545 664 aaKnown RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 HOXC9P31274 260 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 ASIC1P78348 528 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 MUM1L1Q5H9M0 696 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 TMEM87AQ8NBN3 555 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 NIP7Q9Y221 180 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 SAMM50Q9Y512 469 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 FAM169AQ9Y6X4 670 aa7.61□□□□□ -1.19
CLCN3-211ENST00000613795 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.61□□□□□ -1.19
CLCN3-211ENST00000613795 RNF8O76064 485 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 ZNF202O95125 648 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SNX16P57768 344 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 RBM6P78332 1123 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 NFE2L3Q9Y4A8 694 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 MRFAP1Q9Y605 127 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SAMD9Q5K651 1589 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 LMBR1LQ6UX01 489 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SDCCAG8Q86SQ7 713 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 TEX11Q8IYF3 940 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 MEIS3Q99687 375 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 TUBB6Q9BUF5 446 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 TM6SF1Q9BZW5 370 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SSX2IPQ9Y2D8 614 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 A0A1W2PP64 1363 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 KIAA0232Q92628 1395 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 CCDC169A6NNP5 214 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 VAMP4O75379 141 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 PSMC4P43686 418 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 PSMD7P51665 324 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 DRP2Q13474 957 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 CASP8Q14790 479 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 MTHFSDQ2M296 383 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 RILPL1Q5EBL4 403 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SLC9C2Q5TAH2 1124 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 UBL4BQ8N7F7 174 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 TXLNGQ9NUQ3 528 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 CTNND2Q9UQB3 1225 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SNX14Q9Y5W7 946 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 CCT6AP40227 531 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 APOBRQ0VD83 1088 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 NMIQ13287 307 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 GSDMBQ8TAX9 411 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SLF1Q9BQI6 1058 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 NOC4LQ9BVI4 516 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 SATB2Q9UPW6 733 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 ATP6V0A2Q9Y487 856 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 PTPRKQ15262 1439 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 I3L4J1 428 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 IRS4O14654 1257 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 LDHBP07195 334 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 MAGEA1P43355 309 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 RANBP1P43487 201 aa7.6□□□□□ -1.19
CLCN3-211ENST00000613795 CAPRIN2Q6IMN6 1127 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 ABTB1Q969K4 478 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 GFM2Q969S9 779 aaKnown RBP7.6□□□□□ -1.19
CLCN3-211ENST00000613795 RGS12O14924 1447 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 PAK1Q13153 545 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 RPS6KA1Q15418 735 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 SLC9C1Q4G0N8 1177 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 HEATR3Q7Z4Q2 680 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 TCP11Q8WWU5 503 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 ZFYVE16Q7Z3T8 1539 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 ZWINTO95229 277 aa7.59□□□□□ -1.19
CLCN3-211ENST00000613795 ELF1P32519 619 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms