RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.69■■□□□ 1.38
CPNE9-205ENST00000613455 SCN4AP35499 1836 aa23.69■■□□□ 1.38
CPNE9-205ENST00000613455 TBC1D12O60347 775 aa23.68■■□□□ 1.38
CPNE9-205ENST00000613455 TROAPQ12815 778 aa23.68■■□□□ 1.38
CPNE9-205ENST00000613455 SMARCC2Q8TAQ2 1214 aa23.68■■□□□ 1.38
CPNE9-205ENST00000613455 POLR2AP24928 1970 aaKnown RBP23.68■■□□□ 1.38
CPNE9-205ENST00000613455 MAP3K10Q02779 954 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 RRP1BQ14684 758 aaKnown RBP23.67■■□□□ 1.38
CPNE9-205ENST00000613455 CATIPQ7Z7H3 387 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 MTMR4Q9NYA4 1195 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 STX8Q9UNK0 236 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 WDR90Q96KV7 1748 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 DDAH1O94760 285 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 ADD1P35611 737 aaKnown RBP23.67■■□□□ 1.38
CPNE9-205ENST00000613455 PKP1Q13835 747 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 CLEC10AQ8IUN9 316 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
CPNE9-205ENST00000613455 PITPNM2Q9BZ72 1349 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 MYH4Q9Y623 1939 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 PTPDC1A2A3K4 754 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 DHX16O60231 1041 aaKnown RBP23.66■■□□□ 1.38
CPNE9-205ENST00000613455 NUP133Q8WUM0 1156 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 CHMP4CQ96CF2 233 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 KAT14Q9H8E8 782 aa23.66■■□□□ 1.38
CPNE9-205ENST00000613455 MPHOSPH10O00566 681 aaKnown RBP23.65■■□□□ 1.38
CPNE9-205ENST00000613455 GDF11O95390 407 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 NTRK3Q16288 839 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 RTN1Q16799 776 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 MIGA2Q7L4E1 593 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 FANCBQ8NB91 859 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
CPNE9-205ENST00000613455 JAG1P78504 1218 aa23.64■■□□□ 1.38
CPNE9-205ENST00000613455 CPLX1O14810 134 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 CALM1P0DP23 149 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 CALM2P0DP24 149 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 CALM3P0DP25 149 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 GUCY1A2P33402 732 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 ABCB5Q2M3G0 1257 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 DDX11Q96FC9 970 aa23.64■■□□□ 1.37
CPNE9-205ENST00000613455 POTECB2RU33 542 aa23.63■■□□□ 1.37
CPNE9-205ENST00000613455 PPFIA3O75145 1194 aa23.63■■□□□ 1.37
CPNE9-205ENST00000613455 TOP1P11387 765 aaKnown RBP23.63■■□□□ 1.37
CPNE9-205ENST00000613455 EPHX2P34913 555 aa23.63■■□□□ 1.37
CPNE9-205ENST00000613455 HMGN5P82970 282 aaKnown RBP23.63■■□□□ 1.37
CPNE9-205ENST00000613455 NBPF12Q5TAG4 269 aaPredicted RBP23.63■■□□□ 1.37
CPNE9-205ENST00000613455 TMEM179Q6ZVK1 233 aa23.63■■□□□ 1.37
CPNE9-205ENST00000613455 TTLL1O95922 423 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 GH2P01242 217 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 USP50Q70EL3 339 aaPredicted RBP23.62■■□□□ 1.37
CPNE9-205ENST00000613455 ZDHHC9Q9Y397 364 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 PPP2R3BQ9Y5P8 575 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 ATAD5Q96QE3 1844 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 FDPSP14324 419 aaKnown RBP23.62■■□□□ 1.37
CPNE9-205ENST00000613455 SYT1P21579 422 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 SEPT2Q15019 361 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 RAB3GAP1Q15042 981 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 PPP2R5BQ15173 497 aa23.62■■□□□ 1.37
CPNE9-205ENST00000613455 SSC5DA1L4H1 1573 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 CCDC196A0A1B0GTZ2 297 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 NUCB2P80303 420 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 PRAMEF18Q5VWM3 479 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 MAP3K14Q99558 947 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 KANSL2Q9H9L4 492 aa23.61■■□□□ 1.37
CPNE9-205ENST00000613455 PHF20L1A8MW92 1017 aa23.6■■□□□ 1.37
CPNE9-205ENST00000613455 CDKL5O76039 1030 aa23.6■■□□□ 1.37
CPNE9-205ENST00000613455 IFNAR1P17181 557 aa23.6■■□□□ 1.37
CPNE9-205ENST00000613455 TAF1DQ9H5J8 278 aaPredicted RBP23.6■■□□□ 1.37
CPNE9-205ENST00000613455 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
CPNE9-205ENST00000613455 CLIP2Q9UDT6 1046 aa23.6■■□□□ 1.37
CPNE9-205ENST00000613455 IQCA1LA6NCM1 817 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 GRM4Q14833 912 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 PPP4R3BQ5MIZ7 849 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
CPNE9-205ENST00000613455 RASGRP2Q7LDG7 609 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 SIAH1Q8IUQ4 282 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 LRRC47Q8N1G4 583 aaKnown RBP23.59■■□□□ 1.37
CPNE9-205ENST00000613455 CTCFLQ8NI51 663 aaPredicted RBP23.59■■□□□ 1.37
CPNE9-205ENST00000613455 PHKBQ93100 1093 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 NYAP2Q9P242 653 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 PLEKHA8P1O95397 391 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 BRD1O95696 1058 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 CAP2P40123 477 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 ICA1Q05084 483 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 FUT2Q10981 343 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 TMTC3Q6ZXV5 915 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 NBPF11Q86T75 865 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 CMTR1Q8N1G2 835 aaKnown RBP23.59■■□□□ 1.37
CPNE9-205ENST00000613455 CABP5Q9NP86 173 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 ORC3Q9UBD5 711 aaPredicted RBP23.59■■□□□ 1.37
CPNE9-205ENST00000613455 ZBTB21Q9ULJ3 1066 aa23.59■■□□□ 1.37
CPNE9-205ENST00000613455 STX6O43752 255 aa23.58■■□□□ 1.37
CPNE9-205ENST00000613455 EEF2P13639 858 aaKnown RBP23.58■■□□□ 1.37
CPNE9-205ENST00000613455 DCPSQ96C86 337 aaKnown RBP23.58■■□□□ 1.37
CPNE9-205ENST00000613455 MAD2L2Q9UI95 211 aa23.58■■□□□ 1.37
CPNE9-205ENST00000613455 MYH6P13533 1939 aa23.57■■□□□ 1.36
CPNE9-205ENST00000613455 LARP1BQ659C4 914 aaKnown RBP23.57■■□□□ 1.36
CPNE9-205ENST00000613455 FAM184AQ8NB25 1140 aa23.57■■□□□ 1.36
CPNE9-205ENST00000613455 ZC3H15Q8WU90 426 aaKnown RBP23.57■■□□□ 1.36
CPNE9-205ENST00000613455 MKL1Q969V6 931 aa23.57■■□□□ 1.36
CPNE9-205ENST00000613455 MTMR7Q9Y216 660 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms