RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
CSTF1-208ENST00000613138 ASCC2Q9H1I8 757 aaPredicted RBP15.18■□□□□ 0.02
CSTF1-208ENST00000613138 EFCC1Q9HA90 598 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
CSTF1-208ENST00000613138 ANKRD13CQ8N6S4 541 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
CSTF1-208ENST00000613138 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 FEZ1Q99689 392 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSTF1-208ENST00000613138 OSBPL3Q9H4L5 887 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 KIAA0100Q14667 2235 aaKnown RBP15.17■□□□□ 0.02
CSTF1-208ENST00000613138 PARP14Q460N5 1801 aa15.17■□□□□ 0.02
CSTF1-208ENST00000613138 RASA1P20936 1047 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 SOX10P56693 466 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 CTDSPL2Q05D32 466 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
CSTF1-208ENST00000613138 IL25Q9H293 177 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
CSTF1-208ENST00000613138 SWAP70Q9UH65 585 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 PTCH2Q9Y6C5 1203 aa15.16■□□□□ 0.02
CSTF1-208ENST00000613138 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 BRCA2P51587 3418 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 SDSP20132 328 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 PSMC4P43686 418 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
CSTF1-208ENST00000613138 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 SMCR8Q8TEV9 937 aaPredicted RBP15.15■□□□□ 0.02
CSTF1-208ENST00000613138 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 TBC1D2Q9BYX2 928 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 TXNRD2Q9NNW7 524 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 SLC45A1Q9Y2W3 748 aa15.15■□□□□ 0.02
CSTF1-208ENST00000613138 COL11A1P12107 1806 aaPredicted RBP15.15■□□□□ 0.02
CSTF1-208ENST00000613138 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 MYCP01106 439 aaPredicted RBP15.14■□□□□ 0.01
CSTF1-208ENST00000613138 GNAT2P19087 354 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 VCAM1P19320 739 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
CSTF1-208ENST00000613138 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 SPICE1Q8N0Z3 855 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 NAPBQ9H115 298 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 GABRQQ9UN88 632 aa15.14■□□□□ 0.01
CSTF1-208ENST00000613138 OSBPP22059 807 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 IRX3P78415 501 aaPredicted RBP15.13■□□□□ 0.01
CSTF1-208ENST00000613138 ICA1Q05084 483 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 PPARAQ07869 468 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 TTC22Q5TAA0 569 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 CWC27Q6UX04 472 aaKnown RBP15.13■□□□□ 0.01
CSTF1-208ENST00000613138 TMEM179Q6ZVK1 233 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 KIAA1683Q9H0B3 1180 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
CSTF1-208ENST00000613138 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
CSTF1-208ENST00000613138 EEF2P13639 858 aaKnown RBP15.12■□□□□ 0.01
CSTF1-208ENST00000613138 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
CSTF1-208ENST00000613138 HERVK_113P62684 666 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 ARHGEF6Q15052 776 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
CSTF1-208ENST00000613138 Q3C1V9 767 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 CHMP4CQ96CF2 233 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 C12orf42Q96LP6 360 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 PAGR1Q9BTK6 254 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 RPAP3Q9H6T3 665 aaPredicted RBP15.12■□□□□ 0.01
CSTF1-208ENST00000613138 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
CSTF1-208ENST00000613138 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 CNMDO75829 334 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
CSTF1-208ENST00000613138 HAND2P61296 217 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 PRKCZQ05513 592 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
CSTF1-208ENST00000613138 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 PNMA3Q9UL41 463 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
CSTF1-208ENST00000613138 FGAP02671 866 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 KIF22Q14807 665 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 CATSPERGQ6ZRH7 1159 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 NACAP1Q9BZK3 213 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
CSTF1-208ENST00000613138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
CSTF1-208ENST00000613138 A0A0G2JMZ2 1700 aa15.09■□□□□ 0.01
CSTF1-208ENST00000613138 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
CSTF1-208ENST00000613138 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
CSTF1-208ENST00000613138 RAD21O60216 631 aa15.09■□□□□ 0.01
CSTF1-208ENST00000613138 NMT2O60551 498 aa15.09■□□□□ 0.01
CSTF1-208ENST00000613138 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSTF1-208ENST00000613138 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms