RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 C1orf115Q9H7X2 142 aa28.71■■■□□ 2.19
MMP28-203ENST00000612672 NAV1Q8NEY1 1877 aa28.71■■■□□ 2.19
MMP28-203ENST00000612672 RLFQ13129 1914 aa28.71■■■□□ 2.19
MMP28-203ENST00000612672 MAP2K5Q13163 448 aa28.7■■■□□ 2.18
MMP28-203ENST00000612672 TATDN1Q6P1N9 297 aa28.7■■■□□ 2.18
MMP28-203ENST00000612672 SSH3Q8TE77 659 aa28.7■■■□□ 2.18
MMP28-203ENST00000612672 CYP7A1P22680 504 aa28.69■■■□□ 2.18
MMP28-203ENST00000612672 CCDC158Q5M9N0 1113 aa28.69■■■□□ 2.18
MMP28-203ENST00000612672 ACER1Q8TDN7 264 aa28.69■■■□□ 2.18
MMP28-203ENST00000612672 ZNF512BQ96KM6 892 aaPredicted RBP28.69■■■□□ 2.18
MMP28-203ENST00000612672 BTBD7Q9P203 1132 aa28.69■■■□□ 2.18
MMP28-203ENST00000612672 A0A0G2JMZ2 1700 aa28.69■■■□□ 2.18
MMP28-203ENST00000612672 HLA-DOAP06340 250 aa28.68■■■□□ 2.18
MMP28-203ENST00000612672 GTF3C2Q8WUA4 911 aaPredicted RBP28.68■■■□□ 2.18
MMP28-203ENST00000612672 RABGAP1Q9Y3P9 1069 aa28.68■■■□□ 2.18
MMP28-203ENST00000612672 VCAM1P19320 739 aa28.67■■■□□ 2.18
MMP28-203ENST00000612672 EVX2Q03828 476 aa28.67■■■□□ 2.18
MMP28-203ENST00000612672 CATSPERGQ6ZRH7 1159 aa28.67■■■□□ 2.18
MMP28-203ENST00000612672 CCAR1Q8IX12 1150 aaKnown RBP28.67■■■□□ 2.18
MMP28-203ENST00000612672 TRPV1Q8NER1 839 aa28.67■■■□□ 2.18
MMP28-203ENST00000612672 NPLOC4Q8TAT6 608 aa28.67■■■□□ 2.18
MMP28-203ENST00000612672 CCDC8Q9H0W5 538 aaPredicted RBP28.67■■■□□ 2.18
MMP28-203ENST00000612672 ZNF236Q9UL36 1845 aa28.66■■■□□ 2.18
MMP28-203ENST00000612672 EDC3Q96F86 508 aaKnown RBP28.66■■■□□ 2.18
MMP28-203ENST00000612672 USP17L15C9J2P7 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L13C9JLJ4 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L11C9JVI0 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L18D6R9N7 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L22D6RA61 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L17D6RBQ6 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L19D6RCP7 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L20D6RJB6 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 IGHA2P01877 340 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 PTPREP23469 700 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 GUCY1A2P33402 732 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 ATP8B2P98198 1209 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 USP17L24Q0WX57 530 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 OS9Q13438 667 aaPredicted RBP28.65■■■□□ 2.18
MMP28-203ENST00000612672 EAF2Q96CJ1 260 aaPredicted RBP28.65■■■□□ 2.18
MMP28-203ENST00000612672 GUCD1Q96NT3 240 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 FEZ1Q99689 392 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 ANTXR1Q9H6X2 564 aa28.65■■■□□ 2.18
MMP28-203ENST00000612672 IPO8O15397 1037 aaKnown RBP28.64■■■□□ 2.18
MMP28-203ENST00000612672 SURF6O75683 361 aaKnown RBP28.64■■■□□ 2.18
MMP28-203ENST00000612672 IDH1O75874 414 aaKnown RBP28.64■■■□□ 2.18
MMP28-203ENST00000612672 SHMT1P34896 483 aa28.64■■■□□ 2.18
MMP28-203ENST00000612672 RAB3GAP1Q15042 981 aa28.64■■■□□ 2.18
MMP28-203ENST00000612672 SENP6Q9GZR1 1112 aaPredicted RBP28.64■■■□□ 2.18
MMP28-203ENST00000612672 SPDYE16A6NNV3 312 aaPredicted RBP28.63■■■□□ 2.17
MMP28-203ENST00000612672 CYP2C19P33261 490 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 GRB14Q14449 540 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 WDR78Q5VTH9 848 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 MAGEB6Q8N7X4 407 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 KIAA1683Q9H0B3 1180 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 EHD4Q9H223 541 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 SERPINB13Q9UIV8 391 aa28.63■■■□□ 2.17
MMP28-203ENST00000612672 SLC15A5A6NIM6 579 aa28.62■■■□□ 2.17
MMP28-203ENST00000612672 USP5P45974 858 aa28.62■■■□□ 2.17
MMP28-203ENST00000612672 PLCD1P51178 756 aa28.62■■■□□ 2.17
MMP28-203ENST00000612672 ATN1P54259 1190 aaPredicted RBP28.62■■■□□ 2.17
MMP28-203ENST00000612672 LBX2Q6XYB7 198 aa28.62■■■□□ 2.17
MMP28-203ENST00000612672 CWC22Q9HCG8 908 aaKnown RBP28.62■■■□□ 2.17
MMP28-203ENST00000612672 DDX20Q9UHI6 824 aaKnown RBP28.62■■■□□ 2.17
MMP28-203ENST00000612672 NOP58Q9Y2X3 529 aaKnown RBP28.62■■■□□ 2.17
MMP28-203ENST00000612672 PARP14Q460N5 1801 aa28.62■■■□□ 2.17
MMP28-203ENST00000612672 POTEB2H3BUK9 544 aa28.61■■■□□ 2.17
MMP28-203ENST00000612672 HOXC6P09630 235 aa28.61■■■□□ 2.17
MMP28-203ENST00000612672 ABCB5Q2M3G0 1257 aa28.6■■■□□ 2.17
MMP28-203ENST00000612672 CERKLQ49MI3 558 aaPredicted RBP28.6■■■□□ 2.17
MMP28-203ENST00000612672 MFSD14CQ5VZR4 134 aa28.6■■■□□ 2.17
MMP28-203ENST00000612672 RPAP3Q9H6T3 665 aaPredicted RBP28.6■■■□□ 2.17
MMP28-203ENST00000612672 CCNA1P78396 465 aa28.59■■■□□ 2.17
MMP28-203ENST00000612672 FAM161BQ96MY7 647 aa28.59■■■□□ 2.17
MMP28-203ENST00000612672 RIOK1Q9BRS2 568 aaKnown RBP28.59■■■□□ 2.17
MMP28-203ENST00000612672 A0A1W2PRG0 241 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 CYBAP13498 195 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 CNGA1P29973 690 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 USP14P54578 494 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 LPAR1Q92633 364 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 COL25A1Q9BXS0 654 aaPredicted RBP28.58■■■□□ 2.17
MMP28-203ENST00000612672 MYH8P13535 1937 aa28.58■■■□□ 2.17
MMP28-203ENST00000612672 IGSF3O75054 1194 aa28.57■■■□□ 2.16
MMP28-203ENST00000612672 RLBP1P12271 317 aa28.57■■■□□ 2.16
MMP28-203ENST00000612672 RTP1P59025 263 aa28.57■■■□□ 2.16
MMP28-203ENST00000612672 SEPT2Q15019 361 aa28.57■■■□□ 2.16
MMP28-203ENST00000612672 KIAA1755Q5JYT7 1200 aa28.57■■■□□ 2.16
MMP28-203ENST00000612672 GLRX3O76003 335 aaKnown RBP28.56■■■□□ 2.16
MMP28-203ENST00000612672 ATP2B2Q01814 1243 aa28.56■■■□□ 2.16
MMP28-203ENST00000612672 GABPAQ06546 454 aa28.56■■■□□ 2.16
MMP28-203ENST00000612672 GJC2Q5T442 439 aaPredicted RBP28.56■■■□□ 2.16
MMP28-203ENST00000612672 ANO1Q5XXA6 986 aa28.56■■■□□ 2.16
MMP28-203ENST00000612672 ZKSCAN2Q63HK3 967 aa28.56■■■□□ 2.16
MMP28-203ENST00000612672 COL11A1P12107 1806 aaPredicted RBP28.55■■■□□ 2.16
MMP28-203ENST00000612672 DNM1LO00429 736 aa28.55■■■□□ 2.16
MMP28-203ENST00000612672 MOV10L1Q9BXT6 1211 aaKnown RBP28.55■■■□□ 2.16
MMP28-203ENST00000612672 ZNFX1Q9P2E3 1918 aaKnown RBP28.55■■■□□ 2.16
MMP28-203ENST00000612672 FAM109BQ6ICB4 259 aaPredicted RBP28.54■■■□□ 2.16
MMP28-203ENST00000612672 IVNS1ABPQ9Y6Y0 642 aa28.54■■■□□ 2.16
MMP28-203ENST00000612672 ADORA2AP29274 412 aa28.53■■■□□ 2.16
MMP28-203ENST00000612672 TTC6Q86TZ1 520 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms