RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
CIT-219ENST00000612548 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
CIT-219ENST00000612548 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
CIT-219ENST00000612548 PDCP20941 246 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 TNNI2P48788 182 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 TROAPQ12815 778 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
CIT-219ENST00000612548 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
CIT-219ENST00000612548 CDKL5O76039 1030 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 CALM1P0DP23 149 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 CALM2P0DP24 149 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 CALM3P0DP25 149 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 EPS15P42566 896 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 FOSBP53539 338 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 NTRK3Q16288 839 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
CIT-219ENST00000612548 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 PHKBQ93100 1093 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
CIT-219ENST00000612548 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
CIT-219ENST00000612548 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 FDPSP14324 419 aaKnown RBP17.22■□□□□ 0.35
CIT-219ENST00000612548 RASA3Q14644 834 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
CIT-219ENST00000612548 HERC5Q9UII4 1024 aaKnown RBP17.22■□□□□ 0.35
CIT-219ENST00000612548 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 MTMR6Q9Y217 621 aa17.22■□□□□ 0.35
CIT-219ENST00000612548 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 GDF11O95390 407 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 SHROOM1Q2M3G4 852 aaPredicted RBP17.21■□□□□ 0.35
CIT-219ENST00000612548 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
CIT-219ENST00000612548 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
CIT-219ENST00000612548 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 ZSCAN22P10073 491 aaPredicted RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 CDC37L1Q7L3B6 337 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 IFNAR1P17181 557 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 NOVP48745 357 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 ANGEL2Q5VTE6 544 aaKnown RBP17.2■□□□□ 0.34
CIT-219ENST00000612548 SLC26A6Q9BXS9 759 aa17.2■□□□□ 0.34
CIT-219ENST00000612548 MYH6P13533 1939 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 H3BQV1 296 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 TTLL1O95922 423 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
CIT-219ENST00000612548 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
CIT-219ENST00000612548 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 MIGA2Q7L4E1 593 aa17.19■□□□□ 0.34
CIT-219ENST00000612548 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
CIT-219ENST00000612548 FMNL1O95466 1100 aaPredicted RBP17.18■□□□□ 0.34
CIT-219ENST00000612548 F13A1P00488 732 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
CIT-219ENST00000612548 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 NBR1Q14596 966 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 APOBEC3FQ8IUX4 373 aaKnown RBP17.18■□□□□ 0.34
CIT-219ENST00000612548 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 GGA3Q9NZ52 723 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
CIT-219ENST00000612548 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
CIT-219ENST00000612548 GRM4Q14833 912 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
CIT-219ENST00000612548 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
CIT-219ENST00000612548 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 RASGRP2Q7LDG7 609 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
CIT-219ENST00000612548 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 UBE2Q2LH0YL09 131 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 TBC1D12O60347 775 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 BAG4O95429 457 aaKnown RBP17.17■□□□□ 0.34
CIT-219ENST00000612548 GH2P01242 217 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 KIF5BP33176 963 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 SEPT2Q15019 361 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 FERMT3Q86UX7 667 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 TRIM22Q8IYM9 498 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 CHAMP1Q96JM3 812 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 AIFM3Q96NN9 605 aa17.17■□□□□ 0.34
CIT-219ENST00000612548 MAP3K14Q99558 947 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms