RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TAF7LQ5H9L4 462 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FERMT2Q96AC1 680 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FBXL18Q96ME1 805 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 DNAH12Q6ZR08 3092 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RFX7Q2KHR2 1363 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 HOXC6P09630 235 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CYP2C19P33261 490 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RRP1BQ14684 758 aaKnown RBP9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TMEM240Q5SV17 173 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CCDC129Q6ZRS4 1044 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 VGLL2Q8N8G2 317 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 NPLOC4Q8TAT6 608 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 DNAAF4Q8WXU2 420 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 HERVK_113Q902F9 699 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 LRRC37A2A6NM11 1700 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PRDX5P30044 214 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 GNAI1P63096 354 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ATP2B2Q01814 1243 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 LRRC41Q15345 812 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ANO1Q5XXA6 986 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 WDR66Q8TBY9 1149 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 KCNH6Q9H252 994 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 NKX2-4Q9H2Z4 354 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 DDX4Q9NQI0 724 aaKnown RBP9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PHF24Q9UPV7 400 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 GBF1Q92538 1859 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ATAD5Q96QE3 1844 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 SLC15A5A6NIM6 579 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FAM196BA6NMK8 535 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CNMDO75829 334 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PTPREP23469 700 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CAP2P40123 477 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FOXK2Q01167 660 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FAAP100Q0VG06 881 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RAB30Q15771 203 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CCAR1Q8IX12 1150 aaKnown RBP9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ZFP91Q96JP5 570 aaPredicted RBP9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 YBX2Q9Y2T7 364 aaKnown RBP9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
PTCHD3P1-201ENST00000612350 SEPT4O43236 478 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PDE8BO95263 885 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 TIMP1P01033 207 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 FGFR2P21802 821 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 EMP3P54852 163 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 BACE1P56817 501 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 LRRC24Q50LG9 513 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ANKRD33Q7Z3H0 272 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 TOX2Q96NM4 488 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PAGR1Q9BTK6 254 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 STK31Q9BXU1 1019 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 COG5Q9UP83 839 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GAKO14976 1311 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MYH2Q9UKX2 1941 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ZNF318Q5VUA4 2279 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PQBP1O60828 265 aaKnown RBP9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GLRX3O76003 335 aaKnown RBP9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 FLIIQ13045 1269 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MTMR2Q13614 643 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GRB14Q14449 540 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 WDR43Q15061 677 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 BEND3Q5T5X7 828 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MFSD5Q6N075 450 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ZNF365Q70YC5 407 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GTF3C2Q8WUA4 911 aaPredicted RBP9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 KAZALD1Q96I82 304 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 AS3MTQ9HBK9 375 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 TMOD4Q9NZQ9 345 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 TBX21Q9UL17 535 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MTCH2Q9Y6C9 303 aa9.01□□□□□ -0.97
PTCHD3P1-201ENST00000612350 C19orf81C9J6K1 198 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 LDHBP07195 334 aaKnown RBP9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ACRP10323 421 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 JAG1P78504 1218 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms