RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GABPAQ06546 454 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 ZYXQ15942 572 aaKnown RBP14.74□□□□□ -0.05
CBWD3-208ENST00000612050 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 RAET1EQ8TD07 263 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 OSBP2Q969R2 916 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 COA7Q96BR5 231 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 NAPBQ9H115 298 aa14.74□□□□□ -0.05
CBWD3-208ENST00000612050 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
CBWD3-208ENST00000612050 PATL2C9JE40 543 aaKnown RBP14.73□□□□□ -0.05
CBWD3-208ENST00000612050 TNPO2O14787 897 aaKnown RBP14.73□□□□□ -0.05
CBWD3-208ENST00000612050 NUCB1Q02818 461 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 FAM110CQ1W6H9 321 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 SBK1Q52WX2 424 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 CTR9Q6PD62 1173 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 ANKRD13CQ8N6S4 541 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 TMEM106CQ9BVX2 250 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 KIAA1683Q9H0B3 1180 aa14.73□□□□□ -0.05
CBWD3-208ENST00000612050 ASCC2Q9H1I8 757 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-208ENST00000612050 ECM2O94769 699 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-208ENST00000612050 CYP2D6P10635 497 aa14.72□□□□□ -0.05
CBWD3-208ENST00000612050 BCRP11274 1271 aa14.72□□□□□ -0.05
CBWD3-208ENST00000612050 HOXA7P31268 230 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-208ENST00000612050 CDK8P49336 464 aa14.72□□□□□ -0.05
CBWD3-208ENST00000612050 PDE4BQ07343 736 aa14.72□□□□□ -0.05
CBWD3-208ENST00000612050 SEPT2Q15019 361 aa14.72□□□□□ -0.05
CBWD3-208ENST00000612050 ZNF444Q8N0Y2 327 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-208ENST00000612050 MYPNQ86TC9 1320 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 ADGRA2Q96PE1 1338 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 GSG1L2A8MUP6 293 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 M0R2C6 588 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 HIP1O00291 1037 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 IGHDP01880 384 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
CBWD3-208ENST00000612050 ICA1Q05084 483 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 ZMYM1Q5SVZ6 1142 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 DYNLL2Q96FJ2 89 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 TRIM47Q96LD4 638 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 C12orf42Q96LP6 360 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 HELLSQ9NRZ9 838 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 SRRDQ9UH36 339 aa14.71□□□□□ -0.05
CBWD3-208ENST00000612050 MGAMO43451 1857 aa14.71□□□□□ -0.06
CBWD3-208ENST00000612050 CHGBP05060 677 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 CCNA1P78396 465 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 MLLT1Q03111 559 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-208ENST00000612050 IFNL3Q8IZI9 196 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 SLC44A5Q8NCS7 719 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 LPAR1Q92633 364 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 BIN2Q9UBW5 565 aaPredicted RBP14.7□□□□□ -0.06
CBWD3-208ENST00000612050 PTCH2Q9Y6C5 1203 aa14.7□□□□□ -0.06
CBWD3-208ENST00000612050 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 SOX10P56693 466 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 HERVK_113P62684 666 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 UBXN2AP68543 259 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 JAG1P78504 1218 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 GPRC5AQ8NFJ5 357 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 OSBPL3Q9H4L5 887 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 GOPCQ9HD26 462 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 DIAPH3Q9NSV4 1193 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
CBWD3-208ENST00000612050 RAD21O60216 631 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 AKR1B1P15121 316 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 SHROOM1Q2M3G4 852 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-208ENST00000612050 MCMDC2Q4G0Z9 681 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 STK11IPQ8N1F8 1099 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 SLAIN1Q8ND83 568 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 ROBO3Q96MS0 1386 aa14.68□□□□□ -0.06
CBWD3-208ENST00000612050 VCAM1P19320 739 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 GRK4P32298 578 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 PLEKHM2Q8IWE5 1019 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 ARMC5Q96C12 935 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 SEC62Q99442 399 aaKnown RBP14.67□□□□□ -0.06
CBWD3-208ENST00000612050 P2RX7Q99572 595 aaKnown RBP14.67□□□□□ -0.06
CBWD3-208ENST00000612050 PAGR1Q9BTK6 254 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 RPAP3Q9H6T3 665 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-208ENST00000612050 HOXC10Q9NYD6 342 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 MORF4L1Q9UBU8 362 aa14.67□□□□□ -0.06
CBWD3-208ENST00000612050 TSPY3P0CV98 308 aa14.66□□□□□ -0.06
CBWD3-208ENST00000612050 TSPY8P0CW00 308 aa14.66□□□□□ -0.06
CBWD3-208ENST00000612050 MAPK4P31152 587 aa14.66□□□□□ -0.06
CBWD3-208ENST00000612050 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
CBWD3-208ENST00000612050 TMX2Q9Y320 296 aa14.66□□□□□ -0.06
CBWD3-208ENST00000612050 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms