RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 ZEB2O60315 1214 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 MNAT1P51948 309 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 NRKQ7Z2Y5 1582 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 KRT13P13646 458 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
CDH1-212ENST00000611625 MORC3Q14149 939 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 C8orf74Q6P047 294 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
CDH1-212ENST00000611625 H7C1W4 665 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 ARID5BQ14865 1188 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 CABP7Q86V35 215 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 CDCA7Q9BWT1 371 aaPredicted RBP13.91□□□□□ -0.18
CDH1-212ENST00000611625 LRWD1Q9UFC0 647 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
CDH1-212ENST00000611625 PRPHP41219 470 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 MAGEA1P43355 309 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 GOLGA8FQ08AF8 430 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 GOLGA8DPQ0D2H9 430 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 WHAMMP3Q1A5X7 153 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
CDH1-212ENST00000611625 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
CDH1-212ENST00000611625 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
CDH1-212ENST00000611625 HS2ST1Q7LGA3 356 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
CDH1-212ENST00000611625 GYG1P46976 350 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 CCDC155Q8N6L0 562 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
CDH1-212ENST00000611625 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 GNPATO15228 680 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
CDH1-212ENST00000611625 ARPP21Q9UBL0 812 aaPredicted RBP13.9□□□□□ -0.18
CDH1-212ENST00000611625 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.19
CDH1-212ENST00000611625 BLIDQ8IZY5 108 aa13.9□□□□□ -0.19
CDH1-212ENST00000611625 PLVAPQ9BX97 442 aa13.9□□□□□ -0.19
CDH1-212ENST00000611625 ZC3H12CQ9C0D7 883 aaKnown RBP13.9□□□□□ -0.19
CDH1-212ENST00000611625 FAM13AO94988 1023 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 PTGDRQ13258 359 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 PLCD4Q9BRC7 762 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 ATP2C2O75185 946 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 SCG2P13521 617 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 IFNAR1P17181 557 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 DMTNQ08495 405 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 DCAF17Q5H9S7 520 aaPredicted RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 NAP1L4Q99733 375 aaKnown RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 CCDC174Q6PII3 467 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 PHLPP2Q6ZVD8 1323 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 ATP1A3P13637 1013 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 PLA2G4DQ86XP0 818 aa13.89□□□□□ -0.19
CDH1-212ENST00000611625 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
CDH1-212ENST00000611625 CPS1P31327 1500 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 OTUD6BQ8N6M0 293 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDH1-212ENST00000611625 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDH1-212ENST00000611625 H7C1D1 291 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 ZRSR2Q15696 482 aaKnown RBP13.88□□□□□ -0.19
CDH1-212ENST00000611625 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 VSTM4Q8IW00 320 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 PSMB7Q99436 277 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GOLPH3LQ9H4A5 285 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
CDH1-212ENST00000611625 MMP1P03956 469 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 NR5A1Q13285 461 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 IL25Q9H293 177 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms