RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
SNX20-205ENST00000610485 STRBPQ96SI9 672 aaKnown RBP15.5■□□□□ 0.07
SNX20-205ENST00000610485 CYP2D7A0A087X1C5 515 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 MX1P20591 662 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 ZYXQ15942 572 aaKnown RBP15.49■□□□□ 0.07
SNX20-205ENST00000610485 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
SNX20-205ENST00000610485 OSBP2Q969R2 916 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 COA7Q96BR5 231 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 TXNRD2Q9NNW7 524 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 ARPP21Q9UBL0 812 aaPredicted RBP15.49■□□□□ 0.07
SNX20-205ENST00000610485 MYH7P12883 1935 aa15.49■□□□□ 0.07
SNX20-205ENST00000610485 MGAMO43451 1857 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 SMIM22K7EJ46 135 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 MPHOSPH10O00566 681 aaKnown RBP15.48■□□□□ 0.07
SNX20-205ENST00000610485 ADCY3O60266 1144 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 MYCP01106 439 aaPredicted RBP15.48■□□□□ 0.07
SNX20-205ENST00000610485 VCAM1P19320 739 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 MTFR1Q15390 333 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
SNX20-205ENST00000610485 GIMAP6Q6P9H5 292 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 CTR9Q6PD62 1173 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 PXYLP1Q8TE99 480 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 RBPJLQ9UBG7 517 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 BRCA2P51587 3418 aa15.48■□□□□ 0.07
SNX20-205ENST00000610485 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 GSG1L2A8MUP6 293 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 GPAA1O43292 621 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 AKR1B1P15121 316 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 CDK8P49336 464 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 UBXN2AP68543 259 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 SBK1Q52WX2 424 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 ANKRD45Q5TZF3 282 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 CATSPERGQ6ZRH7 1159 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 GPRC5AQ8NFJ5 357 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 CCDC17Q96LX7 622 aa15.47■□□□□ 0.07
SNX20-205ENST00000610485 M0R2C6 588 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 PEX10O60683 326 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 CCL5P13501 91 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 ERVK-9P63128 1117 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 ERVK-24P63145 666 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
SNX20-205ENST00000610485 STAP2Q9UGK3 403 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 GJD2Q9UKL4 321 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.07
SNX20-205ENST00000610485 ELNP15502 786 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 GNAT2P19087 354 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 Q3C1V9 767 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 LBX2Q6XYB7 198 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 SIAH1Q8IUQ4 282 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
SNX20-205ENST00000610485 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
SNX20-205ENST00000610485 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
SNX20-205ENST00000610485 RABGAP1Q9Y3P9 1069 aa15.45■□□□□ 0.06
SNX20-205ENST00000610485 CNMDO75829 334 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 INHAP05111 366 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 GJB1P08034 283 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 MAPK4P31152 587 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 ICA1Q05084 483 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 ZMYM1Q5SVZ6 1142 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 PRPF38BQ5VTL8 546 aaKnown RBP15.44■□□□□ 0.06
SNX20-205ENST00000610485 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 SHISA4Q96DD7 197 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 SH2D4AQ9H788 454 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 ARHGEF10LQ9HCE6 1279 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
SNX20-205ENST00000610485 BAZ2AQ9UIF9 1905 aaKnown RBP15.43■□□□□ 0.06
SNX20-205ENST00000610485 SPDYE16A6NNV3 312 aaPredicted RBP15.43■□□□□ 0.06
SNX20-205ENST00000610485 GJA8P48165 433 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 PDE1AP54750 535 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 KIAA1755Q5JYT7 1200 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 SOCS4Q8WXH5 440 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 LPAR1Q92633 364 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 SEC62Q99442 399 aaKnown RBP15.43■□□□□ 0.06
SNX20-205ENST00000610485 RNF208Q9H0X6 261 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 PORCNQ9H237 461 aa15.43■□□□□ 0.06
SNX20-205ENST00000610485 PATL2C9JE40 543 aaKnown RBP15.42■□□□□ 0.06
SNX20-205ENST00000610485 RASA1P20936 1047 aa15.42■□□□□ 0.06
SNX20-205ENST00000610485 TDO2P48775 406 aa15.42■□□□□ 0.06
SNX20-205ENST00000610485 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
SNX20-205ENST00000610485 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNX20-205ENST00000610485 RWDD1Q9H446 243 aaPredicted RBP15.42■□□□□ 0.06
SNX20-205ENST00000610485 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
SNX20-205ENST00000610485 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms