RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CLEC10AQ8IUN9 316 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 ARHGAP39Q9C0H5 1083 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 HELLSQ9NRZ9 838 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
CD9-212ENST00000610354 ROBO3Q96MS0 1386 aa15.27■□□□□ 0.03
CD9-212ENST00000610354 A0A1W2PRG0 241 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 MINDY4BA8MYZ0 360 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 APPP05067 770 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 BCRP11274 1271 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 OTOP1Q7RTM1 612 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
CD9-212ENST00000610354 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 STK11IPQ8N1F8 1099 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 DDRGK1Q96HY6 314 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.26■□□□□ 0.03
CD9-212ENST00000610354 CABP5Q9NP86 173 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
CD9-212ENST00000610354 MGAMO43451 1857 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
CD9-212ENST00000610354 RASA1P20936 1047 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 TDO2P48775 406 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 ERO1AQ96HE7 468 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
CD9-212ENST00000610354 DOCK3Q8IZD9 2030 aa15.25■□□□□ 0.03
CD9-212ENST00000610354 LACTBP83111 547 aaPredicted RBP15.24■□□□□ 0.03
CD9-212ENST00000610354 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
CD9-212ENST00000610354 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 KIAA1755Q5JYT7 1200 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 POTEEQ6S8J3 1075 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 AMOTL1Q8IY63 956 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 C12orf42Q96LP6 360 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 KIAA1683Q9H0B3 1180 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 ASCC2Q9H1I8 757 aaPredicted RBP15.24■□□□□ 0.03
CD9-212ENST00000610354 TRIM17Q9Y577 477 aa15.24■□□□□ 0.03
CD9-212ENST00000610354 PEX10O60683 326 aa15.23■□□□□ 0.03
CD9-212ENST00000610354 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
CD9-212ENST00000610354 HOXA7P31268 230 aaPredicted RBP15.23■□□□□ 0.03
CD9-212ENST00000610354 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
CD9-212ENST00000610354 P2RX7Q99572 595 aaKnown RBP15.23■□□□□ 0.03
CD9-212ENST00000610354 IL25Q9H293 177 aa15.23■□□□□ 0.03
CD9-212ENST00000610354 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
CD9-212ENST00000610354 RLFQ13129 1914 aa15.23■□□□□ 0.03
CD9-212ENST00000610354 PRDM1O75626 825 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 ALX1Q15699 326 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 NACAP1Q9BZK3 213 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 NAPBQ9H115 298 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 EFCC1Q9HA90 598 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 INCENPQ9NQS7 918 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 HPS5Q9UPZ3 1129 aa15.22■□□□□ 0.03
CD9-212ENST00000610354 HSPD1P10809 573 aaKnown RBP15.21■□□□□ 0.03
CD9-212ENST00000610354 CTDSPL2Q05D32 466 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 PPARAQ07869 468 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 PKN2Q16513 984 aaKnown RBP15.21■□□□□ 0.03
CD9-212ENST00000610354 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
CD9-212ENST00000610354 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 TRIM47Q96LD4 638 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 FEZ1Q99689 392 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 PTPN22Q9Y2R2 807 aa15.21■□□□□ 0.03
CD9-212ENST00000610354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
CD9-212ENST00000610354 HTTP42858 3142 aa15.21■□□□□ 0.02
CD9-212ENST00000610354 IGKV6D-41A0A0C4DH26 115 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 FGAP02671 866 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 VCAM1P19320 739 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 OSBPP22059 807 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
CD9-212ENST00000610354 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
CD9-212ENST00000610354 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 MKNK2Q9HBH9 465 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 PNMA3Q9UL41 463 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 MYH4Q9Y623 1939 aa15.2■□□□□ 0.02
CD9-212ENST00000610354 EEF2P13639 858 aaKnown RBP15.19■□□□□ 0.02
CD9-212ENST00000610354 PSMC4P43686 418 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 USP14P54578 494 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 ICA1Q05084 483 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
CD9-212ENST00000610354 NKX2-3Q8TAU0 364 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
CD9-212ENST00000610354 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 PARP14Q460N5 1801 aa15.19■□□□□ 0.02
CD9-212ENST00000610354 USP17L15C9J2P7 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L13C9JLJ4 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L11C9JVI0 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L18D6R9N7 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L22D6RA61 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L17D6RBQ6 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L19D6RCP7 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L20D6RJB6 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 CNMDO75829 334 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms