RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ARMT1Q9H993 441 aa19.38■□□□□ 0.69
SGMS1-209ENST00000609445 PAK6Q9NQU5 681 aaPredicted RBP19.38■□□□□ 0.69
SGMS1-209ENST00000609445 COLQQ9Y215 455 aaPredicted RBP19.38■□□□□ 0.69
SGMS1-209ENST00000609445 MYH8P13535 1937 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
SGMS1-209ENST00000609445 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
SGMS1-209ENST00000609445 ATP5JP18859 108 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 ERVK-9P63128 1117 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 ERVK-24P63145 666 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 PDE3AQ14432 1141 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.37■□□□□ 0.69
SGMS1-209ENST00000609445 PORCNQ9H237 461 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
SGMS1-209ENST00000609445 PRKAB2O43741 272 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 HMGCRP04035 888 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 CYP2B6P20813 491 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 ADD2P35612 726 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 SEPT2Q15019 361 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 SLC44A5Q8NCS7 719 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 TRIB2Q92519 343 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 KIAA1683Q9H0B3 1180 aa19.36■□□□□ 0.69
SGMS1-209ENST00000609445 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L15C9J2P7 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L13C9JLJ4 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L11C9JVI0 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L18D6R9N7 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L22D6RA61 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L17D6RBQ6 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L19D6RCP7 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L20D6RJB6 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 MBD4O95243 580 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 VCAM1P19320 739 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 USP17L24Q0WX57 530 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 HAUS7Q99871 368 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 HTATIP2Q9BUP3 242 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 LRRCC1Q9C099 1032 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 ALPK3Q96L96 1907 aa19.35■□□□□ 0.69
SGMS1-209ENST00000609445 MPHOSPH10O00566 681 aaKnown RBP19.34■□□□□ 0.69
SGMS1-209ENST00000609445 CNMDO75829 334 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 USP14P54578 494 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 CATSPERGQ6ZRH7 1159 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 GTF3C2Q8WUA4 911 aaPredicted RBP19.34■□□□□ 0.69
SGMS1-209ENST00000609445 DYNLL2Q96FJ2 89 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
SGMS1-209ENST00000609445 SMIM22K7EJ46 135 aa19.33■□□□□ 0.68
SGMS1-209ENST00000609445 MAPK4P31152 587 aa19.33■□□□□ 0.68
SGMS1-209ENST00000609445 GPR142Q7Z601 462 aa19.33■□□□□ 0.68
SGMS1-209ENST00000609445 DIS3LQ8TF46 1054 aaKnown RBP19.33■□□□□ 0.68
SGMS1-209ENST00000609445 CYP2D7A0A087X1C5 515 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
SGMS1-209ENST00000609445 SOCS4Q8WXH5 440 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 USP6NLQ92738 828 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.685e-6■■■■□ 23.1
SGMS1-209ENST00000609445 RPAP3Q9H6T3 665 aaPredicted RBP19.32■□□□□ 0.68
SGMS1-209ENST00000609445 HMX1Q9NP08 348 aaPredicted RBP19.32■□□□□ 0.68
SGMS1-209ENST00000609445 RABGAP1Q9Y3P9 1069 aa19.32■□□□□ 0.68
SGMS1-209ENST00000609445 RPTORQ8N122 1335 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 CCL14Q16627 93 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 MORN1Q5T089 497 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 PLEKHH3Q7Z736 793 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 PAWRQ96IZ0 340 aaKnown RBP19.31■□□□□ 0.68
SGMS1-209ENST00000609445 BTBD7Q9P203 1132 aa19.31■□□□□ 0.68
SGMS1-209ENST00000609445 RLFQ13129 1914 aa19.3■□□□□ 0.68
SGMS1-209ENST00000609445 SPDYE16A6NNV3 312 aaPredicted RBP19.3■□□□□ 0.68
SGMS1-209ENST00000609445 XRCC5P13010 732 aaKnown RBP19.3■□□□□ 0.68
SGMS1-209ENST00000609445 AKR1B1P15121 316 aa19.3■□□□□ 0.68
SGMS1-209ENST00000609445 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
SGMS1-209ENST00000609445 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
SGMS1-209ENST00000609445 MAP3K21Q5TCX8 1036 aa19.3■□□□□ 0.68
SGMS1-209ENST00000609445 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
SGMS1-209ENST00000609445 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
SGMS1-209ENST00000609445 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
SGMS1-209ENST00000609445 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
SGMS1-209ENST00000609445 RGS2P41220 211 aa19.29■□□□□ 0.68
SGMS1-209ENST00000609445 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
SGMS1-209ENST00000609445 WDR78Q5VTH9 848 aa19.29■□□□□ 0.68
SGMS1-209ENST00000609445 PUS7LQ9H0K6 701 aaKnown RBP19.29■□□□□ 0.68
SGMS1-209ENST00000609445 SWAP70Q9UH65 585 aa19.29■□□□□ 0.68
SGMS1-209ENST00000609445 USP17L12C9JPN9 530 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 USP17L21D6R901 530 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 CAPN2P17655 700 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
SGMS1-209ENST00000609445 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 TSHZ3Q63HK5 1081 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 APBA2Q99767 749 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 DCTPP1Q9H773 170 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 NR2E3Q9Y5X4 410 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 SLC4A4Q9Y6R1 1079 aa19.28■□□□□ 0.68
SGMS1-209ENST00000609445 RANBP2P49792 3224 aaKnown RBP19.28■□□□□ 0.68
SGMS1-209ENST00000609445 CDK8P49336 464 aa19.27■□□□□ 0.68
SGMS1-209ENST00000609445 MNX1P50219 401 aaPredicted RBP19.27■□□□□ 0.68
SGMS1-209ENST00000609445 CCNA1P78396 465 aa19.27■□□□□ 0.68
SGMS1-209ENST00000609445 MAP2K5Q13163 448 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms