RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
LINC01278-204ENST00000609143 RASA1P20936 1047 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 CHRNA5P30532 468 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 TYRO3Q06418 890 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 PPP6R2O75170 966 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 BAG6P46379 1132 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 CDK8P49336 464 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 SNW1Q13573 536 aaKnown RBP13.2□□□□□ -0.3
LINC01278-204ENST00000609143 PKN1Q16512 942 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 FAM43AQ8N2R8 423 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 TEKT1Q969V4 418 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
LINC01278-204ENST00000609143 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 GNAQP50148 359 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
LINC01278-204ENST00000609143 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
LINC01278-204ENST00000609143 PTPAQ15257 358 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
LINC01278-204ENST00000609143 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
LINC01278-204ENST00000609143 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
LINC01278-204ENST00000609143 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 A0A1B0GVL5 298 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 CMA1P23946 247 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 KRT2P35908 639 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 PICALMQ13492 652 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 GRM4Q14833 912 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
LINC01278-204ENST00000609143 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 ECE2O60344 883 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
LINC01278-204ENST00000609143 SCNN1DP51172 638 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
LINC01278-204ENST00000609143 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
LINC01278-204ENST00000609143 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 CAVIN2O95810 425 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 SCG2P13521 617 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 NDUFA8P51970 172 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 NR5A1Q13285 461 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
LINC01278-204ENST00000609143 TMEM47Q9BQJ4 181 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
LINC01278-204ENST00000609143 CUTAO60888 179 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 CRKP46108 304 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
LINC01278-204ENST00000609143 ANO6Q4KMQ2 910 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
LINC01278-204ENST00000609143 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 MRIQ9BWK5 157 aa13.16□□□□□ -0.3
LINC01278-204ENST00000609143 PFKFB1P16118 471 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 DACT2Q5SW24 774 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 ZDHHC15Q96MV8 337 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 DDX4Q9NQI0 724 aaKnown RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 USP25Q9UHP3 1055 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 KIAA2012Q0VF49 1180 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 STX1AQ16623 288 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 FBXO41Q8TF61 875 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 NOL7Q9UMY1 257 aaKnown RBP13.15□□□□□ -0.3
LINC01278-204ENST00000609143 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
LINC01278-204ENST00000609143 ZNF202O95125 648 aa13.15□□□□□ -0.31
LINC01278-204ENST00000609143 HLA-DOAP06340 250 aa13.15□□□□□ -0.31
LINC01278-204ENST00000609143 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.31
LINC01278-204ENST00000609143 GABPAQ06546 454 aa13.15□□□□□ -0.31
LINC01278-204ENST00000609143 AOC3Q16853 763 aa13.15□□□□□ -0.31
LINC01278-204ENST00000609143 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms