RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 XBP1P17861 261 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 PPP1R2P41236 205 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 KRT83P78385 493 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 SSRP1Q08945 709 aaKnown RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 CASP8Q14790 479 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 NTRK3Q16288 839 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 LONRF3Q496Y0 759 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 TTC31Q49AM3 519 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 ARSIQ5FYB1 569 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 EMC10Q5UCC4 262 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 CCDC70Q6NSX1 233 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 CCDC129Q6ZRS4 1044 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 SH3RF1Q7Z6J0 888 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 NOSTRINQ8IVI9 506 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 TRIM22Q8IYM9 498 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 FAM177A1Q8N128 213 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 RETREG2Q8NC44 543 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 LRRN4CLQ8ND94 238 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 NEK11Q8NG66 645 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 DHX58Q96C10 678 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 LRRC2Q9BYS8 371 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 DEF6Q9H4E7 631 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 NCOA5Q9HCD5 579 aaKnown RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 A1CFQ9NQ94 594 aaKnown RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 INTS13Q9NVM9 706 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 CWC25Q9NXE8 425 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 LIMA1Q9UHB6 759 aaKnown RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 GGA2Q9UJY4 613 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 DDX60Q8IY21 1712 aaKnown RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 RGPD8O14715 1765 aaPredicted RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 KIF28PB7ZC32 967 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 H7C1D1 291 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 BIN1O00499 593 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ZBTB43O43298 467 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 MFAP3LO75121 409 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 SEC31AO94979 1220 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 DEXIO95424 95 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 HOXB1P14653 301 aaPredicted RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 USP14P54578 494 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 IRX3P78415 501 aaPredicted RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 CDK17Q00537 523 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 AMPD2Q01433 879 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 APBA1Q02410 837 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 PDE4DQ08499 809 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 PAPD7Q5XG87 772 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 LMBR1LQ6UX01 489 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 APTXQ7Z2E3 356 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ZNF572Q7Z3I7 529 aaPredicted RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 AMOTL1Q8IY63 956 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 TTC5Q8N0Z6 440 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 PDILTQ8N807 584 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 NOC3LQ8WTT2 800 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 RAPGEF4Q8WZA2 1011 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 OSBP2Q969R2 916 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 EDC3Q96F86 508 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 NUP58Q9BVL2 599 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 KRT23Q9C075 422 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 CDHR5Q9HBB8 845 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 PDE11AQ9HCR9 933 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ABCB6Q9NP58 842 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ZCCHC17Q9NP64 241 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 ZNHIT6Q9NWK9 470 aaKnown RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 RMND1Q9NWS8 449 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 FBXO2Q9UK22 296 aaPredicted RBP7.26□□□□□ -1.25
HDDC2-205ENST00000608456 MYO6Q9UM54 1294 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 JRKLQ9Y4A0 524 aa7.26□□□□□ -1.25
HDDC2-205ENST00000608456 SCN11AQ9UI33 1791 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 EIF3CLB5ME19 914 aaKnown RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 H3BQF6 201 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 OPA1O60313 960 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 ZEB2O60315 1214 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 MMP1P03956 469 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 UQCRFS1P1P0C7P4 283 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 EPB41P11171 864 aaKnown RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 PCP11498 1178 aaKnown RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 PHKG2P15735 406 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 TATP17735 454 aaPredicted RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 GNAT2P19087 354 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 BMP6P22004 513 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 TRAPPC10P48553 1259 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 GTF2A1P52655 376 aaPredicted RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 ANTXR2P58335 489 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 GUCY1B3Q02153 619 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 AIMP1Q12904 312 aaKnown RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 PNOCQ13519 176 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 CUL4BQ13620 913 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 SART3Q15020 963 aaKnown RBP7.25□□□□□ -1.25
HDDC2-205ENST00000608456 ALS2CLQ60I27 953 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 APOA5Q6Q788 366 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 MMS22LQ6ZRQ5 1243 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 TOGARAM2Q6ZUX3 1019 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 B4GALNT4Q76KP1 1039 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 TRAPPC11Q7Z392 1133 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 CCDC170Q8IYT3 715 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 USHBP1Q8N6Y0 703 aa7.25□□□□□ -1.25
HDDC2-205ENST00000608456 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms