RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
CTCFL-217ENST00000608425 B4GALNT2Q8NHY0 566 aa13.4□□□□□ -0.26
CTCFL-217ENST00000608425 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
CTCFL-217ENST00000608425 RSRC1Q96IZ7 334 aaKnown RBP13.4□□□□□ -0.26
CTCFL-217ENST00000608425 EPAS1Q99814 870 aa13.4□□□□□ -0.26
CTCFL-217ENST00000608425 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTCFL-217ENST00000608425 KIF5CO60282 957 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 STX10O60499 249 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 APBA1Q02410 837 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 PDCD2Q16342 344 aaPredicted RBP13.4□□□□□ -0.27
CTCFL-217ENST00000608425 GNPTABQ3T906 1256 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 CPLX3Q8WVH0 158 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.27
CTCFL-217ENST00000608425 FBXO3Q9UK99 471 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 L3MBTL1Q9Y468 752 aa13.4□□□□□ -0.27
CTCFL-217ENST00000608425 GLI3P10071 1580 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 SPDYE3A6NKU9 549 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
CTCFL-217ENST00000608425 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
CTCFL-217ENST00000608425 PRPHP41219 470 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 SCNN1BP51168 640 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 NLRP12P59046 1061 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 TTMPQ5BVD1 217 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 ZNF473Q8WTR7 871 aaKnown RBP13.39□□□□□ -0.27
CTCFL-217ENST00000608425 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 CHCHD3Q9NX63 227 aaKnown RBP13.39□□□□□ -0.27
CTCFL-217ENST00000608425 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
CTCFL-217ENST00000608425 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 CCDC175P0C221 793 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 HSPA2P54652 639 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 TBX2Q13207 712 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-217ENST00000608425 CREB3L3Q68CJ9 461 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
CTCFL-217ENST00000608425 ENC1O14682 589 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 MAP3K13O43283 966 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTCFL-217ENST00000608425 ANXA1P04083 346 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 LINGO3P0C6S8 592 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 USP14P54578 494 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 ACRBPQ8NEB7 543 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 BAIAP2L1Q9UHR4 511 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 MAP3K2Q9Y2U5 619 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 UTYO14607 1347 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
CTCFL-217ENST00000608425 NECTIN1Q15223 517 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 KIAA1328Q86T90 577 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-217ENST00000608425 BACH1O14867 736 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 MYLK4Q86YV6 388 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-217ENST00000608425 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 MRPS27Q92552 414 aaKnown RBP13.37□□□□□ -0.27
CTCFL-217ENST00000608425 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
CTCFL-217ENST00000608425 EPB41L2O43491 1005 aaKnown RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 ABCD1P33897 745 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 ARMCX6Q7L4S7 300 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 RNPC3Q96LT9 517 aaKnown RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 FAM167BQ9BTA0 163 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 PIDD1Q9HB75 910 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 LSP1P33241 339 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 PDIA6Q15084 440 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 PRAMEF22A3QJZ6 481 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-217ENST00000608425 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 SPAG5Q96R06 1193 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 PSMD1Q99460 953 aa13.36□□□□□ -0.27
CTCFL-217ENST00000608425 COL5A2P05997 1499 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-217ENST00000608425 CYP27B1O15528 508 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms