RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CUL4BQ13620 913 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 NFXL1Q6ZNB6 911 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 FECHP22830 423 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
CDCA3-212ENST00000604599 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 SUFUQ9UMX1 484 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 CTNND2Q9UQB3 1225 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 ZNF185O15231 689 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 ZBTB43O43298 467 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 FAM69CQ0P6D2 419 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
CDCA3-212ENST00000604599 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
CDCA3-212ENST00000604599 B4E1Z4 1266 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 GPAA1O43292 621 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 NDUFA10O95299 355 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 GUCY1A2P33402 732 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 NR5A1Q13285 461 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 KRT31Q15323 416 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 NTRK3Q16288 839 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 ZNF790Q6PG37 636 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 CNPY4Q8N129 248 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 SPATA20Q8TB22 786 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 STAMQ92783 540 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
CDCA3-212ENST00000604599 POLD4Q9HCU8 107 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 DONSONQ9NYP3 566 aa14.02□□□□□ -0.16
CDCA3-212ENST00000604599 A0A087X0B3 334 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 SH2B2O14492 632 aaPredicted RBP14.02□□□□□ -0.17
CDCA3-212ENST00000604599 C2orf54Q08AI8 447 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 DPYDQ12882 1025 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 PI16Q6UXB8 463 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 SND1Q7KZF4 910 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDCA3-212ENST00000604599 EPN1Q9Y6I3 576 aaPredicted RBP14.02□□□□□ -0.17
CDCA3-212ENST00000604599 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 C5P01031 1676 aa14.02□□□□□ -0.17
CDCA3-212ENST00000604599 TARSL2A2RTX5 802 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 PSMD14O00487 310 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 MRPS25P82663 173 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 CCDC122Q5T0U0 273 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 CCNI2Q6ZMN8 369 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 JAKMIP2Q96AA8 810 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 CCDC196A0A1B0GTZ2 297 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 NDUFAB1O14561 156 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 SETQ01105 290 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 PDCLQ13371 301 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 ANKRD18AQ8IVF6 992 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 PRPF38AQ8NAV1 312 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 EPSTI1Q96J88 318 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 GNL3LQ9NVN8 582 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 ADORA1P30542 326 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 SCARF1Q14162 830 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 SAFBQ15424 915 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 TNRQ92752 1358 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
CDCA3-212ENST00000604599 PUS3Q9BZE2 481 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
CDCA3-212ENST00000604599 CLGNO14967 610 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 MMP1P03956 469 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 IL15P40933 162 aaPredicted RBP14□□□□□ -0.17
CDCA3-212ENST00000604599 CASP7P55210 303 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 FOXO4P98177 505 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 SSRP1Q08945 709 aaKnown RBP14□□□□□ -0.17
CDCA3-212ENST00000604599 FKBP15Q5T1M5 1219 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 GBP6Q6ZN66 633 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 CABS1Q96KC9 395 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 INCENPQ9NQS7 918 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 EZH2Q15910 746 aaKnown RBP14□□□□□ -0.17
CDCA3-212ENST00000604599 APPBP2Q92624 585 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 AIDAQ96BJ3 306 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
CDCA3-212ENST00000604599 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 CD248Q9HCU0 757 aa14□□□□□ -0.17
CDCA3-212ENST00000604599 WDR19Q8NEZ3 1342 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 KIAA0754O94854 1291 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 CKAP4Q07065 602 aaKnown RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 OTUD6BQ8N6M0 293 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 HDAC7Q8WUI4 952 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 SRPRBQ9Y5M8 271 aaKnown RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 PLEKHG1Q9ULL1 1385 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 ZAP70P43403 619 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 ATP1A2P50993 1020 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 COPB1P53618 953 aaKnown RBP13.99□□□□□ -0.17
CDCA3-212ENST00000604599 HERVK_113P62684 666 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 RILPL1Q5EBL4 403 aa13.99□□□□□ -0.17
CDCA3-212ENST00000604599 PAPD7Q5XG87 772 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms