RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ACER1Q8TDN7 264 aa21.78■■□□□ 1.08
CCDC12-208ENST00000603885 GTF3C2Q8WUA4 911 aaPredicted RBP21.78■■□□□ 1.08
CCDC12-208ENST00000603885 USP17L12C9JPN9 530 aa21.77■■□□□ 1.08
CCDC12-208ENST00000603885 USP17L21D6R901 530 aa21.77■■□□□ 1.08
CCDC12-208ENST00000603885 GUCY1A2P33402 732 aa21.77■■□□□ 1.08
CCDC12-208ENST00000603885 C12orf60Q5U649 245 aa21.77■■□□□ 1.08
CCDC12-208ENST00000603885 DYNLL2Q96FJ2 89 aa21.77■■□□□ 1.08
CCDC12-208ENST00000603885 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
CCDC12-208ENST00000603885 USP17L15C9J2P7 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L13C9JLJ4 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L11C9JVI0 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L18D6R9N7 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L22D6RA61 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L17D6RBQ6 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L19D6RCP7 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L20D6RJB6 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
CCDC12-208ENST00000603885 GLRX3O76003 335 aaKnown RBP21.76■■□□□ 1.07
CCDC12-208ENST00000603885 ZFYP08048 801 aaPredicted RBP21.76■■□□□ 1.07
CCDC12-208ENST00000603885 USP17L24Q0WX57 530 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 LRRFIP1Q32MZ4 808 aaKnown RBP21.76■■□□□ 1.07
CCDC12-208ENST00000603885 TMEM179Q6ZVK1 233 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 GPRC5AQ8NFJ5 357 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 PXYLP1Q8TE99 480 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 APPBP2Q92624 585 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 MYH8P13535 1937 aa21.76■■□□□ 1.07
CCDC12-208ENST00000603885 DOCK3Q8IZD9 2030 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 CYP2D7A0A087X1C5 515 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 CCL5P13501 91 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 ELNP15502 786 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 VCAM1P19320 739 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
CCDC12-208ENST00000603885 OTUD7AQ8TE49 926 aaPredicted RBP21.75■■□□□ 1.07
CCDC12-208ENST00000603885 STRBPQ96SI9 672 aaKnown RBP21.75■■□□□ 1.07
CCDC12-208ENST00000603885 TXNRD2Q9NNW7 524 aa21.75■■□□□ 1.07
CCDC12-208ENST00000603885 ARPP21Q9UBL0 812 aaPredicted RBP21.75■■□□□ 1.07
CCDC12-208ENST00000603885 MX1P20591 662 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 AAMPQ13685 434 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 CTR9Q6PD62 1173 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 C16orf86Q6ZW13 317 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 OSBP2Q969R2 916 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 CCDC17Q96LX7 622 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 PAGR1Q9BTK6 254 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 RNF208Q9H0X6 261 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 RBPJLQ9UBG7 517 aa21.74■■□□□ 1.07
CCDC12-208ENST00000603885 INHAP05111 366 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 CDK8P49336 464 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 ERVK-24P63145 666 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 HDAC1Q13547 482 aaPredicted RBP21.73■■□□□ 1.07
CCDC12-208ENST00000603885 ANKRD45Q5TZF3 282 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 CATSPERGQ6ZRH7 1159 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
CCDC12-208ENST00000603885 PEX10O60683 326 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 GJB1P08034 283 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 AKR1B1P15121 316 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 MAPK4P31152 587 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 GIMAP6Q6P9H5 292 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 CCAR1Q8IX12 1150 aaKnown RBP21.72■■□□□ 1.07
CCDC12-208ENST00000603885 RPAP3Q9H6T3 665 aaPredicted RBP21.72■■□□□ 1.07
CCDC12-208ENST00000603885 RABGAP1Q9Y3P9 1069 aa21.72■■□□□ 1.07
CCDC12-208ENST00000603885 A0A1W2PRG0 241 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 GSG1L2A8MUP6 293 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 SMIM22K7EJ46 135 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 GPAA1O43292 621 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 GNAT2P19087 354 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 ICA1Q05084 483 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 FSD1Q9BTV5 496 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 UNC93B1Q9H1C4 597 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 ARHGEF10LQ9HCE6 1279 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 GJD2Q9UKL4 321 aa21.71■■□□□ 1.07
CCDC12-208ENST00000603885 GJA8P48165 433 aa21.7■■□□□ 1.06
CCDC12-208ENST00000603885 SBK1Q52WX2 424 aa21.7■■□□□ 1.06
CCDC12-208ENST00000603885 SOCS4Q8WXH5 440 aa21.7■■□□□ 1.06
CCDC12-208ENST00000603885 SHISA4Q96DD7 197 aa21.7■■□□□ 1.06
CCDC12-208ENST00000603885 SH2D4AQ9H788 454 aa21.7■■□□□ 1.06
CCDC12-208ENST00000603885 M0R2C6 588 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 CCNA1P78396 465 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 Q3C1V9 767 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 POTEEQ6S8J3 1075 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 LBX2Q6XYB7 198 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 NUDT12Q9BQG2 462 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 PORCNQ9H237 461 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 SALL3Q9BXA9 1300 aa21.69■■□□□ 1.06
CCDC12-208ENST00000603885 HMGCRP04035 888 aa21.68■■□□□ 1.06
CCDC12-208ENST00000603885 CLEC10AQ8IUN9 316 aa21.68■■□□□ 1.06
CCDC12-208ENST00000603885 LPAR1Q92633 364 aa21.68■■□□□ 1.06
CCDC12-208ENST00000603885 TANGO6Q9C0B7 1094 aa21.68■■□□□ 1.06
CCDC12-208ENST00000603885 CWC22Q9HCG8 908 aaKnown RBP21.68■■□□□ 1.06
CCDC12-208ENST00000603885 TMX2Q9Y320 296 aa21.68■■□□□ 1.06
CCDC12-208ENST00000603885 SPDYE16A6NNV3 312 aaPredicted RBP21.67■■□□□ 1.06
CCDC12-208ENST00000603885 MINDY4BA8MYZ0 360 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 CNMDO75829 334 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 APPP05067 770 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 TDO2P48775 406 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 GPR142Q7Z601 462 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 SIAH1Q8IUQ4 282 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 U2AF1L4Q8WU68 220 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms