RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 CALM1P0DP23 149 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 CALM2P0DP24 149 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 CALM3P0DP25 149 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 PDIA4P13667 645 aaKnown RBP14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 PDCP20941 246 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 RCAN1P53805 252 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 KIF4BQ2VIQ3 1234 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 WDR33Q9C0J8 1336 aaKnown RBP14.8□□□□□ -0.04
HERPUD2-207ENST00000603731 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 NMT2O60551 498 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 DDNO94850 711 aaPredicted RBP14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 MYH6P13533 1939 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 RXRAP19793 462 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 TNFAIP1Q13829 316 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 RAB3GAP1Q15042 981 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 RTN1Q16799 776 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 DEFB115Q30KQ5 88 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 ATRNL1Q5VV63 1379 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 SAMD7Q7Z3H4 446 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 FAM83AQ86UY5 434 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 LDHDQ86WU2 507 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 NSUN7Q8NE18 718 aaKnown RBP14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 CCDC17Q96LX7 622 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 MYL10Q9BUA6 226 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 KAT14Q9H8E8 782 aa14.79□□□□□ -0.04
HERPUD2-207ENST00000603731 PTPDC1A2A3K4 754 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 MPHOSPH10O00566 681 aaKnown RBP14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 JAK2O60674 1132 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 DDAH1O94760 285 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 LMOD1P29536 600 aaPredicted RBP14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 PPP2R5BQ15173 497 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 LARP1BQ659C4 914 aaKnown RBP14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 SH3BP5LQ7L8J4 393 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 SMARCC2Q8TAQ2 1214 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 CSRNP1Q96S65 589 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 MCOLN1Q9GZU1 580 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 GPRC5DQ9NZD1 345 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 MYH4Q9Y623 1939 aa14.78□□□□□ -0.04
HERPUD2-207ENST00000603731 STX6O43752 255 aa14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 SHMT1P34896 483 aa14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 RBM28Q9NW13 759 aaKnown RBP14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 TSKSQ9UJT2 592 aa14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 STX8Q9UNK0 236 aa14.77□□□□□ -0.05
HERPUD2-207ENST00000603731 NID2Q14112 1375 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 PLIN4Q96Q06 1357 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 SCN4AP35499 1836 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 DTNBO60941 627 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 AKR1B1P15121 316 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 SYT1P21579 422 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 ADD1P35611 737 aaKnown RBP14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 FANCBQ8NB91 859 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 TNPO1Q92973 898 aaKnown RBP14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
HERPUD2-207ENST00000603731 GREB1LQ9C091 1923 aaPredicted RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 FAM196BA6NMK8 535 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 H3BQV1 296 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 BRD1O95696 1058 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 TOP1P11387 765 aaKnown RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 CDC27P30260 824 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 KIF5BP33176 963 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 SSRP1Q08945 709 aaKnown RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 PKP1Q13835 747 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 FOXD4L5Q5VV16 416 aaPredicted RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 RCSD1Q6JBY9 416 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 PNMA1Q8ND90 353 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 FOXD4L4Q8WXT5 416 aaPredicted RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 TMEM39BQ9GZU3 492 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 CABP5Q9NP86 173 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 HACL1Q9UJ83 578 aa14.75□□□□□ -0.05
HERPUD2-207ENST00000603731 EGFRP00533 1210 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 AKAP17AQ02040 695 aaKnown RBP14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 RASA3Q14644 834 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 TATDN1Q6P1N9 297 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 APOBEC3FQ8IUX4 373 aaKnown RBP14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 TRIM22Q8IYM9 498 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 TMEM47Q9BQJ4 181 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 DNAJC18Q9H819 358 aa14.74□□□□□ -0.05
HERPUD2-207ENST00000603731 CASP8AP2Q9UKL3 1982 aa14.73□□□□□ -0.05
HERPUD2-207ENST00000603731 TBC1D12O60347 775 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms